I found the problem with the PDB reader -- that should be fixed in terms of
the numbers coming in sometimes a bit low.
On Fri, Jul 22, 2011 at 11:45 AM, Rolf Huehne <[email protected]>wrote:
> On 07/22/2011 06:27 PM, Daniel Carbajo wrote:
> > Not the 'O' but the 0 (zero); the point is that I replace temperature
> > factors with other numbers that go from 0 to 10 and I want to do the
> > following:
> > -if all the values in the residue are 0 (i.e. min and max are equal to
> 0), I
> > take the 0
> > -if all the values in the residue are NOT 0 I take the minimum
> > -if there are values in the residue equal to 0 and others NOT equal to 0,
> I
> > take the minimum that is NOT 0 (i.e. the second minimum)
> >
> > I don't know if I am clear enough... the only problem is how to get the
> > second minimum when the minimum is 0.
> Sorry for the misunderstanding.
>
> You can get the second minimum for example by this command:
>
> var x = {selected and temperature>0}.temperature.min
>
> The "atom properties" table in the Jmol scripting documentation provides
> a good overview about how you can use information like "temperature" in
> selection expressions, labels etc.:
>
>
> http://jena3d.fli-leibniz.de/ImgLibPDB/Jena3D/doc/jmol_scripting/index.htm#atomproperties
>
> Regards,
> Rolf
>
>
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--
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