Hi Birgit Yes, Jmol can calculate and rainbow-color the potential surface if the model contains partial charges for every atom.
I'm not very familiar with Avogadro, but it calculates the potential it is likely that you can save that data in a file. Jmol reads many kinds of file formats. Maybe ask in the Avogadro community what kind of output is available. > I managed it to use little scripts and buttons even if the informations > for the > extensions are not so clear and easy. If you have specific suggestions on how to improve the documentation, please send them and I will see if I can add some in the Wiki. ------------------------------------------------------------------------------ Try New Relic Now & We'll Send You this Cool Shirt New Relic is the only SaaS-based application performance monitoring service that delivers powerful full stack analytics. Optimize and monitor your browser, app, & servers with just a few lines of code. Try New Relic and get this awesome Nerd Life shirt! http://p.sf.net/sfu/newrelic_d2d_apr _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
