Hi Bob,
Did anyone say they had trouble seeing the 'flexible fit' morph?
For those on Macs...
I wonder if anyone else had issues with the 'flexible fit' morph not showing
smooth transitions using Firefox on the Macrunning OSX 10.8.4? It is Firefox
version 21 that I am trying it with. I have cleared the cache, but I still see
it really jumpy. Most times it just hangs on the initial view and then when I
click in the JSmol window it jumps to 'the end' view. Occasionally it will show
the highlights of the atoms in both molecules and then hang there until I click
in it. It as if the refresh isn't working unless I am clicking in the JSmol
window.
It works smoothly in Chrome on the same computer.
Wayne
________________________________
From: "jmol-users-requ...@lists.sourceforge.net"
<jmol-users-requ...@lists.sourceforge.net>
To: jmol-users@lists.sourceforge.net
Sent: Sunday, June 16, 2013 2:00 PM
Subject: JSmol update
*Dihedral-driven morphs*
But, of course, linear morphing could produce some very strange results.
Art Cox and I wondered if an animated "flexible fit" would work. The new
feature allows you to do a bond mapping between two models and then do a
flexible fit -- rotating dihedral angles only -- to transform one model
into another or to take one model to the closest resemblance of another
simply by driving dihedral angles. Art and I have all sorts of ideas where
this might be useful; what do you think?
You can check it out here:
http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm
center column link "flexible fit," which runs the following script. Several
new ideas there:
Enjoy!
Bob
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