It works smoothly for me on a MBP using 10.8.4 and both Safari and Firefox.


On Jun 16, 2013, at 8:50 PM, Wayne Decatur <wdeca...@yahoo.com> wrote:

> Hi Bob,
> Did anyone say they had trouble seeing the 'flexible fit' morph?
> 
> For those on Macs...
> I wonder if anyone else had issues with the 'flexible fit' morph not showing 
> smooth transitions using Firefox on the Mac running OSX 10.8.4? It is Firefox 
> version 21 that I am trying it with. I have cleared the cache, but I still 
> see it really jumpy. Most times it just hangs on the initial view and then 
> when I click in the JSmol window it jumps to 'the end' view. Occasionally it 
> will show the highlights of the atoms in both molecules and then hang there 
> until I click in it. It as if the refresh isn't working unless I am clicking 
> in the JSmol window. 
> It works smoothly in Chrome on the same computer.
> Wayne
> From: "jmol-users-requ...@lists.sourceforge.net" 
> <jmol-users-requ...@lists.sourceforge.net>
> To: jmol-users@lists.sourceforge.net 
> Sent: Sunday, June 16, 2013 2:00 PM
> Subject: JSmol update
> 
> 
> *Dihedral-driven morphs*
> 
> But, of course, linear morphing could produce some very strange results.
> Art Cox and I wondered if an animated "flexible fit" would work. The new
> feature allows you to do a bond mapping between two models and then do a
> flexible fit -- rotating dihedral angles only -- to transform one model
> into another or to take one model to the closest resemblance of another
> simply by driving dihedral angles. Art and I have all sorts of ideas where
> this might be useful; what do you think?
> 
> You can check it out here:
> 
> http://chemapps.stolaf.edu/jmol/jsmol/jsmol.htm
> 
> center column link "flexible fit," which runs the following script. Several
> new ideas there:
> 
> 
> Enjoy!
> 
> Bob
> 
> 
> 
> -
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J. Philip Bays
Emeritus Professor of Chemistry
Department of Chemistry and Physics
Saint Mary's College
Notre Dame, IN 46556
pb...@saintmarys.edu

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