I know Jmol.jar displays PDB files of proteins nicely with various cartoon
options but I have noticed that if I import a PDB structure into a molecular
modelling program and then export the structure in various formats including
PDB (from Spartan) the cartoons do not display in Jmol.jar
So my question is this, how does Jmol.jar detect alpha helices and beta sheets
to be able to display them? Or more helpfully, how can I export structure files
from modified proteins that will still show the cartoons in Jmol? I have a
preference for Mac OS X but could use Windows if that is the only way.
Best regards
Nick
--
Nick Greeves via OS X Mail
Director of Teaching and Learning
Department of Chemistry
University of Liverpool
Donnan and Robert Robinson Laboratories
Crown Street, LIVERPOOL L69 7ZD U.K.
Email address: [email protected]<mailto:[email protected]>
WWW Pages: http://www.chemtube3d.com
Tel: +44 (0)151-794-3506 (3500 secretary)
Dept Fax: +44 (0)151-794-3588
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