Manuel,
> a) Is there a way so that jmol will put molecules with different sizes > with exactly the same scale on screen (i.e. the bonds for all molecules are > plotted with the same dimension). > This will be the case whenever you load two models concurrently. But you can also lock the scale for individually loaded models: zoom 100 # normal zoom for this set rotationRadius 5.0 # or some other value -- half the screen width will be this distance in Angstroms set zoomEnabled FALSE # prevents user from adjusting scale An example of doing this is http://www.stolaf.edu/depts/chemistry/mo/struc (Explore the Database...Click on an element....Click on "View"... try the zoom links. > > b) Do you think I can use jmol to produce for publication quality, white > background pictures, with bond distances? is yes, tips? > Possibly -- you can adjust fonts using, for example: font measures 14 sansserif bold Bob Hanson
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