Well, that's interesting! I confirm, Otis, that I have a stable display in FirstGlance with 1smd. Tested with spinning on for over a minute, also manual rotation and zooming.
But when I display 1d66 instead, spin/rotate/zoom, within 30 seconds the reloads start. I got two reloads in less than a minute. I don't have time tonite to investigate further but this difference might yield a clue if investigated further. Eric MacBook Pro, OS 10.9.5, Safari 7.1 (9537.85.10.17.1) On 11/19/14 1:54 PM, Otis Rothenberger wrote: > Eric, > > I'm on a MacBook Pro. OSX: 10:10:1; Safari: Version 8.0 (10600.1.25.1) > > I don't seem to have any problems working with this page: > > http://bioinformatics.org/firstglance/fgij/fg.htm?mol=1smd&NOJAVA > > But there are about 10 errors listed in the Safari console (below). > > Otis > > > [Log] JSmol load jmolApplet0 loadClazz... (JSmol.min.js, line 268) > [Log] JSmol load jmolApplet0 start applet... (JSmol.min.js, line 268) > [Log] JSmol exec jmolApplet0 loadClazz null -- OK (JSmol.min.js, line 270) > [Log] JSmol exec jmolApplet0 start applet null -- OK (JSmol.min.js, line 270) > [Log] xhr.open async=false url=jsmol/j2s/core/corescript.z.js (JSmol.min.js, > line 177) > [Log] xhr.open async=false > url=http://bioinformatics.org/firstglance/fgij/localPDBFiles/1atom.pdb > (JSmol.min.js, line 177) > [Log] xhr.open async=false url=jsmol/j2s/core/corebio.z.js (JSmol.min.js, > line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/render/MeshRenderer.js > (JSmol.min.js, line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/shape/Mesh.js (JSmol.min.js, line > 177) > [Log] xhr.open async=false url=jsmol/j2s/J/renderbio/RocketRenderer.js > (JSmol.min.js, line 177) > [Log] xhr.open async=false url=jsmol/j2s/core/coretext.z.js (JSmol.min.js, > line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/g3d/HermiteRenderer.js > (JSmol.min.js, line 177) > [Error] XMLHttpRequest.responseType cannot be changed for synchronous HTTP(S) > requests made from the window context. > _getFileData (JSmol.min.js, line 223) > _doAjax (JSmol.min.js, line 230) > (anonymous function) (core.z.js, line 360) > (anonymous function) (core.z.js, line 361) > (anonymous function) (core.z.js, line 772) > (anonymous function) (core.z.js, line 795) > (anonymous function) (core.z.js, line 795) > (anonymous function) (core.z.js, line 2029) > (anonymous function) (core.z.js, line 2035) > (anonymous function) (core.z.js, line 994) > (anonymous function) (core.z.js, line 2021) > (anonymous function) (core.z.js, line 2386) > (anonymous function) (core.z.js, line 2380) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) (core.z.js, line 1162) > (anonymous function) > (anonymous function) (core.z.js, line 1163) > [Log] xhr.open async=false > url=http://chemapps.stolaf.edu/jmol/jsmol/php/jsmol.php?call=getRawDataFromDatabase&database=_&query=http%3A%2F%2Fwww.pdb.org%2Fpdb%2Ffiles%2F1SMD.pdb.gz&encoding=base64 > (JSmol.min.js, line 177) > [Error] Blocked a frame with origin "http://x.vindicosuite.com"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. > send (JSmol.min.js, line 178) > ajax (JSmol.min.js, line 171) > $ajax (JSmol.min.js, line 202) > _ajax (JSmol.min.js, line 210) > _contactServer (JSmol.min.js, line 219) > _getRawDataFromServer (JSmol.min.js, line 215) > _getFileData (JSmol.min.js, line 224) > _doAjax (JSmol.min.js, line 230) > (anonymous function) (core.z.js, line 360) > (anonymous function) (core.z.js, line 361) > (anonymous function) (core.z.js, line 772) > (anonymous function) (core.z.js, line 795) > (anonymous function) (core.z.js, line 795) > (anonymous function) (core.z.js, line 2029) > (anonymous function) (core.z.js, line 2035) > (anonymous function) (core.z.js, line 994) > (anonymous function) (core.z.js, line 2021) > (anonymous function) (core.z.js, line 2386) > (anonymous function) (core.z.js, line 2380) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) > (anonymous function) (core.z.js, line 1162) > (anonymous function) > (anonymous function) (core.z.js, line 1163) > [Log] xhr.open async=false url=jsmol/j2s/core/corezip.z.js (JSmol.min.js, > line 177) > [Log] xhr.open async=false url=jsmol/j2s/core/corescriptmath.z.js > (JSmol.min.js, line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/thread/SpinThread.js > (JSmol.min.js, line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/shapespecial/Dots.js > (JSmol.min.js, line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/geodesic/EnvelopeCalculation.js > (JSmol.min.js, line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/api/JmolEnvCalc.js (JSmol.min.js, > line 177) > [Log] xhr.open async=false url=jsmol/j2s/J/renderspecial/DotsRenderer.js > (JSmol.min.js, line 177) > [Error] Blocked a frame with origin "http://x.vindicosuite.com"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. > [Log] xhr.open async=false url=jsmol/j2s/core/corescriptcmd.z.js > (JSmol.min.js, line 177) > [Log] xhr.open async=false > url=http://chemapps.stolaf.edu/jmol/jsmol/php/jsmol.php?call=getRawDataFromDatabase&database=_&query=http%3A%2F%2Fwww.pdb.org%2Fpdb%2Ffiles%2F1SMD.pdb.gz&encoding=base64 > (JSmol.min.js, line 177) > [Error] Blocked a frame with origin "http://ad.doubleclick.net"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. > (anonymous function) (lidar.js, line 72) > global code (lidar.js, line 96) > [Error] Blocked a frame with origin "http://ad.doubleclick.net"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. > [Log] xhr.open async=false url=jsmol/j2s/JV/PropertyManager.js (JSmol.min.js, > line 177) > [Log] xhr.open async=false url=jsmol/j2s/core/coreprop.z.js (JSmol.min.js, > line 177) > [Error] Blocked a frame with origin "http://ad.doubleclick.net"; from > accessing a frame with origin "http://x.vindicosuite.com";. Protocols, > domains, and ports must match. > Tb (lidar.js, line 22) > Xe (lidar.js, line 86) > (anonymous function) (lidar.js, line 7) > Ka (lidar.js, line 6) > (anonymous function) (lidar.js, line 7) > [Error] Blocked a frame with origin "http://ad.doubleclick.net"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. > Tb (lidar.js, line 22) > Xe (lidar.js, line 86) > (anonymous function) (lidar.js, line 7) > Ka (lidar.js, line 6) > (anonymous function) (lidar.js, line 7) > [Error] Blocked a frame with origin "http://ad.doubleclick.net"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. > Jd (lidar.js, line 73) > Xe (lidar.js, line 86) > (anonymous function) (lidar.js, line 7) > Ka (lidar.js, line 6) > (anonymous function) (lidar.js, line 7) > [Error] Blocked a frame with origin "http://ad.doubleclick.net"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. > Xe (lidar.js, line 86) > (anonymous function) (lidar.js, line 7) > Ka (lidar.js, line 6) > (anonymous function) (lidar.js, line 7) > [Error] Blocked a frame with origin "http://x.vindicosuite.com"; from > accessing a frame with origin "http://bioinformatics.org";. Protocols, > domains, and ports must match. (x2) > > > > -- > Otis Rothenberger > o...@chemagic.com > http://chemagic.com > >> On Nov 19, 2014, at 12:30 PM, Eric Martz <ema...@microbio.umass.edu> wrote: >> >> I confirm the 'Safari reloading JSmol over and over' problem as described by >> Roberto. >> This problem started sometime recently. I have had to use other browsers for >> FirstGlance with JSmol. >> I am running OS 10.9.5 Mavericks on an October 2007 MacBook Pro A1226. >> All Apple software is up to date. >> I am not using Apple iCloud services, at least knowingly. >> I also confirm that sometime recently starting up Safari began to take an >> inordinately long time. >> >> Eric >> > > > > ------------------------------------------------------------------------------ > Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server > from Actuate! Instantly Supercharge Your Business Reports and Dashboards > with Interactivity, Sharing, Native Excel Exports, App Integration & more > Get technology previously reserved for billion-dollar corporations, FREE > http://pubads.g.doubleclick.net/gampad/clk?id=157005751&iu=/4140/ostg.clktrk > _______________________________________________ > Jmol-users mailing list > Jmol-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-users > ------------------------------------------------------------------------------ Download BIRT iHub F-Type - The Free Enterprise-Grade BIRT Server from Actuate! Instantly Supercharge Your Business Reports and Dashboards with Interactivity, Sharing, Native Excel Exports, App Integration & more Get technology previously reserved for billion-dollar corporations, FREE http://pubads.g.doubleclick.net/gampad/clk?id=157005751&iu=/4140/ostg.clktrk _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
