Hi, Nico
Yep that was me that asked about the extension on the talk page @ MW.
Yeah, I saw that Angel & Bob were listed as editors/contributors in
Sourceforge and other places hence why I thought they may be able to
help me.
Brenton
On 6/02/2015 11:27 AM, Nicolas Vervelle wrote:
Hi Brenton,
Documentation on MediaWiki is probably completely outdated.
I was the one who wrote it originally, but it was a long time ago, and
since modifications have been made to the extension and many versions
of MW have been released.
Are you also the one who asked about this on the extension talk page
in MW ?
https://www.mediawiki.org/wiki/Extension_talk:Jmol
I'm currently travelling until mid February, I can't do much until then.
Other people here will probably help you, since the extension is
running on several wikis I believe.
Nico
On Thu, Feb 5, 2015 at 9:38 PM, Brenton Horne <brentonho...@ymail.com
<mailto:brentonho...@ymail.com>> wrote:
Hi,
I see many developers of Jmol also helped develop the MediaWiki Jmol
extension, hence why I felt this would be a decent enough place to ask
for help with it. I followed the installation instructions @
MediaWiki's
Extension:Jmol page, without any obvious problems.
Then when all the steps were finished (including checking
special:version to see if the extension was added, which it was) I
tested it out by adding <jmolPdb>3EIG</jmolPdb> (and other
Jmol-related
wikitext like <jmolFile>(S)-nicotine.sdf</jmolFile> where
(S)-nicotine.sdf is the name of a file on my Wiki) to a random
page and
clicking submit. This resulted in me being left at a blank submit page
(i.e., with PAGENAME?action=submit in the address bar). I have
tried and
retried this just in case I encountered some random server
problem, but
each time I got the same results.
I have since customized my Jmol.body.php file and the structure/naming
of the jsmol extension direct according to the file locations
specified
in Jmol.body.php in an attempt to overcome this problem. I have
had some
(sort of) success in that now I can save a page with these tags in it
without that submit error, but JSmol applet still isn't embedded into
the page. Rather where these tags are placed the PDB ID or file name
appears and is hyperlinked to a javascript command.
If it helps this is my current Jmol.body.php script:
https://drive.google.com/file/d/0B1_sXH68hMWBT1VrMTRNbzJSOHM/view?usp=sharing.
Thanks for your time,
Brenton
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