In the same folder as what?

J. Philip Bays
Emeritus Professor of Chemistry
Saint Mary's College
Norte Dame, IN

Sent from my iPad

> On Jun 18, 2015, at 1:05 AM, Otis Rothenberger <osrot...@chemagic.com> wrote:
> 
> Phil,
> 
> I'm at a loss other than saying that there is something inherent in Bob's 
> JSmol/JSME page that is causing the problem. If you use
> 
> jsmol/jsme/JSME.html
> 
> in the same jsmol folder, then the problem goes away. Clicking anywhere in 
> the FG icon drops the menu.
> 
> Wild, I don’t have a clue, guess: Bob does redefine the JSME jsmeOnLoad 
> function in his page. Peter’s page has a code comment that suggests that 
> loading with this on load function is important with respect to proper applet 
> element display. Maybe the new jsmeOnLoad function is causing the problem.
> 
> Otis
> 
> 
> 
> 
>> On Jun 17, 2015, at 11:03 PM, Philip Bays <pb...@saintmarys.edu> wrote:
>> 
>> And that is specific to Safari.   Works in Firefox.  On the other hand, 
>> Chrome has issues throwing error messages.
>> 
>> 
>>> On Jun 17, 2015, at 9:31 PM, Otis Rothenberger <osrot...@chemagic.com> 
>>> wrote:
>>> 
>>> Phil,
>>> 
>>> Bob is doing something on those pages that is way over my head! The hidden 
>>> FG button actually throws a JS error when you expose it and click it. The 
>>> way over my head part comes via:
>>> 
>>> js/JSmolJME.js
>>> 
>>> I can see that he’s integrating JSmol with JSME, but I get lost real fast 
>>> if I try to get down to specifics in the .js file. As usual, Bob’s approach 
>>> is elegant. It allows very simple communication between JSmol (multiple 
>>> applets) and  a single JSME applet with this code:
>>> 
>>> Jmol.show2d(jmol, false)  and Jmol.show2d(jmol, true)
>>> 
>>> It may be that he is using 300X300 to hide the FG button because of 
>>> something js/JSmolJME.js is doing that interferes with the button. I 
>>> vaguely recall (years ago) some warnings from Bob about this implementation 
>>> of Jmol with JME.
>>> 
>>> The following JSME template would offer you an alternate approach:
>>> 
>>> jsmol/jsme/JSME.html
>>> 
>>> Alternatively, use
>>> 
>>> http://chemagic.com/molecules/jsme.htm
>>> 
>>> It’s stripped down to absolute bare bones. You have to write separate 
>>> JavaScript to make JSmol and JSME talk to each other, but the JSME and 
>>> JSmol functions are there to do that - Jmol functions that were not in 
>>> place when Jmol first started using JME. Back then I was using a clumsy 
>>> Jmol load-data approach. Jmol 2015 vs Jmol 2008: Thanks in large part to 
>>> Bob, it’s come a long way.
>>> 
>>> Otis
>>> 
>>> 
>>> 
>>>> On Jun 17, 2015, at 4:50 PM, Philip Bays <pb...@saintmarys.edu> wrote:
>>>> 
>>>> OK.   I have found the source of my issue, but not the solution yet.   
>>>> Please note the jsmol>jsmetest2 file in the distribution.  If you edit the 
>>>> file to expand the width to 400, you see the FG button.  But if you try to 
>>>> use this applet, none of the vertical buttons work, nor does the FG.   
>>>> Since I was using that as my coding pattern, I reproduced the problem.   
>>>> Now to look at it in more detail tomorrow.
>>>> 
>>>> 
>>>> 
>>>> 
>>>>> On Jun 17, 2015, at 3:58 PM, Otis Rothenberger <osrot...@chemagic.com> 
>>>>> wrote:
>>>>> 
>>>>> Phil,
>>>>> 
>>>>> Nah, Bob just likes squares! The JSME applet needs to be 400X300 to see 
>>>>> all the buttons. The 300X300 applet just cuts off the buttons after 
>>>>> cyclooctane.
>>>>> 
>>>>> You could definitely teak the old JME FG button. Again this goes back to 
>>>>> JME Java applet. In fact, it was not a button. It was a JavaScript drop 
>>>>> down menu that could be modified by some type of cookie structure that 
>>>>> remembered your drop entries. This is where I got the idea of using Local 
>>>>> Storage to store JME structures. Users can store 50 JME structures in our 
>>>>> application page that I linked to earlier.
>>>>> 
>>>>> Otis
>>>>> 
>>>>> 
>>>>> 
>>>>>> On Jun 17, 2015, at 3:33 PM, Philip Bays <pb...@saintmarys.edu> wrote:
>>>>>> 
>>>>>> If you look at some of Bob’s examples, you will find that they are 
>>>>>> biasing some of the buttons, including FG.  I vaguely recall that there 
>>>>>> was a way to turn them on and off.
>>>>>> 
>>>>>> 
>>>>>>> On Jun 17, 2015, at 2:21 PM, Otis Rothenberger <osrot...@chemagic.com> 
>>>>>>> wrote:
>>>>>>> 
>>>>>>> There is no option setting for FG, it should just be there. At least I 
>>>>>>> think that’s the case. You can check my options in the above JSME page.
>>>>>> 
>>>>>> Philip Bays
>>>>>> Emeritus Professor of Chemistry
>>>>>> Saint Mary's College
>>>>>> Notre Dame, IN 46556
>>>>>> pb...@saintmarys.edu
>>>>>> 
>>>>>> 
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>>>> 
>>>> Philip Bays
>>>> Emeritus Professor of Chemistry
>>>> Saint Mary's College
>>>> Notre Dame, IN 46556
>>>> pb...@saintmarys.edu
>>>> 
>>>> 
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>> 
>> Philip Bays
>> Emeritus Professor of Chemistry
>> Saint Mary's College
>> Notre Dame, IN 46556
>> pb...@saintmarys.edu
>> 
>> 
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