On Fri, Apr 1, 2016 at 2:52 PM, Philip Bays <pb...@saintmarys.edu> wrote:
> I have a file entitled 5e6e.pdb.gz that I downloaded this week. Using
> previous versions of jsmol.min, this file would load via drag-and-drop or
> using the local-file load mechanism. In the latest version, jsmol version
> (03.31) I get a "file not recognized" error. I can download the structure
> directly from RCSB.
>
with Firefox/Windows and Chrome/Windows I had no problem drag-dropping into
JSmol.
Is this perhaps browser/platform dependent?
>
> A definition question: In the various sample test files involving
> macromolecules that I have looked at, Bob uses the terms “structure” and
> “groups" as a color and display choices. I am not sure what I am looking
> at in each case. I thought it might be 4° structure, but now I am not sure.
>
>
structure is type of secondary structure -- different types of helix,
sheet, etc.
group is just 1->n within each chain.
> Phil
>
> Philip Bays
> Emeritus Professor of Chemistry
> Saint Mary's College
> Notre Dame, IN 46556
> pb...@saintmarys.edu
>
>
>
>
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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Department of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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