On 05/18/2016 11:38 AM, Angel Herráez wrote:
> I certainly would prefer to have Java available in the distribution. For large
> proteins and complexes there is still a significant difference in performance.
>
I would agree with Angel. I still prefer the Java version because of the 
much better performance with larger structures. And the performance is 
also independent of the browser performance. I frequently get drops in 
performance even with smaller protein structures, depending on how busy 
the browser currently is (coping for example with all the background 
tasks from ads or other animations inside visited pages).
But being able to provide the HTML5 alternative is also important.

> Maybe the nonsigned variant can be dropped / separated into the other
> download
>
> On the other hand, I would vote for not having the extra files in the
> distribution like examples, scripts, copy of jQuery etc
> Just leave what is needed for an operative JSmol, HTML5+Java
>
I am not sure if this will really be more advantageous than 
disadvantageous, except for the quite large 'data' directory. And I 
thought jQuery is needed for an operative JSmol.
Maybe it would be sufficient to have a clearer separation between 
necessary and optional/documentational stuff.

Regards,
Rolf

-- 

Rolf Huehne
Postdoc

Leibniz Institute on Aging - Fritz Lipmann Institute (FLI)
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