Yes it is. But the problem is not there. I achieve to make almost all parameters, via ffprobe -show_format -show_streams, to be equal, for the file generated by ffmpeg binary vs file generated by my application with ffmpeg API.
The only differences are about bitrate and file size. But neither in ffmpeg command line or in my C code I'm setting the bitrate, and want to leave it by default. But it seems that ffmpeg tools do internal tricks and I can't figure it out.
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