> And if it's not too much of a problem how do you exactly specify subdomains ?
> is it part of mesh class?

You can manually set the sudomian_id() for an element after you read in the
mesh, or many formats support specifying this in the mesh file itself.  The
ExodusII format and our own XDA/XDR format, for example, allow each element
to be defined with its own subdomain id.




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