Am Donnerstag, den 10.11.2011, 07:17 -0700 schrieb Cody Permann: > On Nov 10, 2011, at 4:22 AM, robert wrote: > > > Am Mittwoch, den 24.08.2011, 22:16 -0500 schrieb Roy Stogner: > > > >> > >> Hi Robert, > >> > >> My experience with the BIG machines is that many of them don't support > >> dynamic linking. This static build produces bigger > >> binaries but simplifies the runtime environment on the compute nodes. Most > >> of the Cray machines are designed this way including > >> Jaguar. I can't say for sure what IBM does since I don't have experience > >> with that architecture but before you dive very far > >> into this, I would suggest you try configuring libmesh with > >> "--disable-shared" and see if that resolves the problem. > >> > >> Best Regards, > >> Cody > >> > > > > > > I have to bring up an old topic: When compiling libmesh (0.7.1) with > > petsc3.1 on a BlueGene/P I had some troudle some months ago. Following > > the suggestion of Cody above I could resolve the problem. > > Now I wanted to buile the svn version of libmesh but with petsc.3.2 (the > > only change in configuring petsc was "--download-ml"). I am following > > the same configuration options as two months ago: > > ./configure --enable-parmesh --disable-shared > > > > However, I get the following abort: > > > > /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libpetsc.a(dlimpl.o): > > In function `PetscDLOpen': > > dlimpl.c:(.text+0xa0): warning: Using 'dlopen' in statically linked > > applications requires at runtime the shared libraries from the glibc > > version used for linking > > /home/bodner/software/libmesh_svn/lib/powerpc64-unknown-linux-gnu_opt/libmesh.a(perf_log.powerpc64-unknown-linux-gnu.opt.o): > > In function `libMesh::PerfLog::get_info_header() const': > > perf_log.C:(.text+0x2d88): warning: Using 'getpwuid' in statically > > linked applications requires at runtime the shared libraries from the > > glibc version used for linking > > /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libpetsc.a(send.o): > > In function `PetscOpenSocket': > > send.c:(.text+0x1d4): warning: Using 'gethostbyname' in statically > > linked applications requires at runtime the shared libraries from the > > glibc version used for linking > > collect2: ld gab 1 als Ende-Status zurück > > make: *** [bin/amr-opt] error 1 > > > > I see three warnings here but I don't see any errors. Are there additional > messages that you didn't paste here? > > > > > Any ideas? > > > > Thanks > >
Cody, Well, not surprisingly, the new build didn't change anything. Below I have pasted all the output since "Building Contributed Packages". I haven't found any error message though. The configure options for petsc: Configure Options: --configModules=PETSc.Configure --optionsModule=PETSc.compilerOptions --with-mpi-dir=/bgsys/drivers/ppcfloor/comm --with-x=0 --wi th-is-color-value-type=short --with-shared-libraries=0 -COPTFLAGS="-O3 -qarch=450d -qtune=450 -qmaxmem=-1" -CXXOPTFLAGS="-O3 -qarch=450d -qtune=450 -qmaxmem=-1" -FOPTFLAGS="-O3 -qarch=450d -qtune=450 -qmaxmem=-1" --with-debugging=0 --with-fortran-kernels=1 --with-batch=1 --known-mpi-shared-libra ries=0 --known-memcmp-ok --known-sizeof-char=1 --known-sizeof-void-p=4 --known-sizeof-short=2 --known-sizeof-int=4 --known-sizeof-long=4 --known-siz eof-size_t=4 --known-sizeof-long-long=8 --known-sizeof-float=4 --known-sizeof-double=8 --known-bits-per-byte=8 --known-sizeof-MPI_Comm=4 --known-siz eof-MPI_Fint=4 --known-mpi-long-double=1 --known-level1-dcache-assoc=0 --known-level1-dcache-linesize=32 --known-level1-dcache-size=32768 --download -hypre=1 --download-plapack=1 --download-parmetis=1 --download-umfpack=1 --download-triangle=1 --download-spooles=1 --download-superlu=1 --download- superlu_dist=1 --download-blacs=1 --download-scalapack=1 --download-mumps=1 --download-spai=1 --download-prometheus=1 --download-chaco=1 --download- ml=1 --download-f-blas-lapack=1 PETSC_ARCH=arch-bgp-ibm-opt configuring slepc - was done without extra options: ./configure configuring libmesh: --enable-parmesh --disable-shared The environment variables are set correctly: echo $PETSC_DIR /home/bodner/software/petsc-3.2-p5 echo $PETSC_ARCH arch-bgp-ibm-opt echo $SLEPC_DIR /home/bodner/software/slepc-3.2-p1 Robert ---------------------------------------------- ------- Building Contributed Packages -------- ---------------------------------------------- --- Building LASPACK ------------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/laspack' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/laspack' --- Building Metis --------------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/metis/Lib' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/metis/Lib' --- Building Parmetis ------------------------ make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/parmetis/Lib' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/parmetis/Lib' --- Building sfcurves ------------------------ make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/sfcurves' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/sfcurves' --- Building libgzstream --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/gzstream' <<< libgzstream is disabled, not building >>> make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/gzstream' --- Building TetGen --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/tetgen' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/tetgen' --- Building triangle --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/triangle' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/triangle' --- Building gmv --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/gmv' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/gmv' --- Building netCDF --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/netcdf/Lib' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/netcdf/Lib' --- Building ExodusII --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/exodusii/Lib/src' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/exodusii/Lib/src' --- Building Nemesis --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/nemesis/Lib' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/nemesis/Lib' --- Building libHilbert --------------------- make[2]: Entering directory `/home/bodner/software/libmesh_svn/contrib/libHilbert' make[2]: Für das Ziel »all« ist nichts zu tun. make[2]: Leaving directory `/home/bodner/software/libmesh_svn/contrib/libHilbert' ---------------------------------------------- ----- Done Building Contributed Packages ----- ---------------------------------------------- make[1]: Leaving directory `/home/bodner/software/libmesh_svn/contrib' Compiling C++ (in optimized mode) src/apps/amr.C... Linking bin/amr-opt /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(initbalance.o): In function `Balance_Partition__': initbalance.c:(.text+0x0): multiple definition of `Balance_Partition__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(initbalance.powerpc64-unknown-linux-gnu.opt.o):initbalance.c:(.text+0xed0): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `Balance_Partition__' changed from 6032 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(initbalance.powerpc64-unknown-linux-gnu.opt.o) to 9076 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(initbalance.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(mdiffusion.o): In function `ExtractGraph__': mdiffusion.c:(.text+0x18b0): multiple definition of `ExtractGraph__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(mdiffusion.powerpc64-unknown-linux-gnu.opt.o):mdiffusion.c:(.text+0x0): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `ExtractGraph__' changed from 3032 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(mdiffusion.powerpc64-unknown-linux-gnu.opt.o) to 1924 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(mdiffusion.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `ComputeHKWayLoadImbalance__': serial.c:(.text+0x16ec): multiple definition of `ComputeHKWayLoadImbalance__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x160): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `ComputeHKWayLoadImbalance__' changed from 616 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 304 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `AreAllHVwgtsBelow__': serial.c:(.text+0x160c): multiple definition of `AreAllHVwgtsBelow__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x0): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `AreAllHVwgtsBelow__' changed from 352 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 224 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `SerialRemap__': serial.c:(.text+0x181c): multiple definition of `SerialRemap__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x69e4): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `SerialRemap__' changed from 5672 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 3064 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `SSMIncKeyCmp__': serial.c:(.text+0x2414): multiple definition of `SSMIncKeyCmp__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x3c8): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `SSMIncKeyCmp__' changed from 64 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 212 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `Serial_Compute2WayHLoadImbalance__': serial.c:(.text+0x4400): multiple definition of `Serial_Compute2WayHLoadImbalance__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x408): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `Serial_Compute2WayHLoadImbalance__' changed from 544 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 300 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `Serial_SelectQueue__': serial.c:(.text+0x3e5c): multiple definition of `Serial_SelectQueue__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x2b70): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `Serial_SelectQueue__' changed from 1796 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 1204 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `Serial_BetterBalance__': serial.c:(.text+0x4310): multiple definition of `Serial_BetterBalance__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x240c): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `Serial_BetterBalance__' changed from 632 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 240 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `Serial_AreAnyVwgtsBelow__': serial.c:(.text+0x72e8): multiple definition of `Serial_AreAnyVwgtsBelow__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x628): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `Serial_AreAnyVwgtsBelow__' changed from 352 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 224 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `Serial_SelectQueueOneWay__': serial.c:(.text+0x6d7c): multiple definition of `Serial_SelectQueueOneWay__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0xe10): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `Serial_SelectQueueOneWay__' changed from 1048 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 404 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `ComputeSerialEdgeCut__': serial.c:(.text+0x73c8): multiple definition of `ComputeSerialEdgeCut__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x788): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `ComputeSerialEdgeCut__' changed from 548 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 312 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o): In function `ComputeSerialTotalV__': serial.c:(.text+0x7500): multiple definition of `ComputeSerialTotalV__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o):serial.c:(.text+0x9ac): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `ComputeSerialTotalV__' changed from 512 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(serial.powerpc64-unknown-linux-gnu.opt.o) to 244 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(serial.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o): In function `FreeWSpace__': memory.c:(.text+0x380): multiple definition of `FreeWSpace__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o):memory.c:(.text+0xb4): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `FreeWSpace__' changed from 64 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o) to 168 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o): In function `FreeCtrl__': memory.c:(.text+0x428): multiple definition of `FreeCtrl__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o):memory.c:(.text+0x668): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `FreeCtrl__' changed from 36 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o) to 64 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o): In function `CreateGraph__': memory.c:(.text+0x468): multiple definition of `CreateGraph__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o):memory.c:(.text+0x628): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `CreateGraph__' changed from 64 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o) to 84 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o): In function `InitGraph__': memory.c:(.text+0x4bc): multiple definition of `InitGraph__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o):memory.c:(.text+0x0): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `InitGraph__' changed from 180 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o) to 624 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o): In function `FreeGraph__': memory.c:(.text+0x72c): multiple definition of `FreeGraph__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o):memory.c:(.text+0x470): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `FreeGraph__' changed from 440 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o) to 244 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o): In function `FreeInitialGraphAndRemap__': memory.c:(.text+0xb98): multiple definition of `FreeInitialGraphAndRemap__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o):memory.c:(.text+0xf4): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `FreeInitialGraphAndRemap__' changed from 892 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(memory.powerpc64-unknown-linux-gnu.opt.o) to 400 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(memory.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o): In function `SetUpCtrl__': grsetup.c:(.text+0x4d8): multiple definition of `SetUpCtrl__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o):grsetup.c:(.text+0x24ac): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `SetUpCtrl__' changed from 132 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o) to 200 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o): In function `ChangeNumbering__': grsetup.c:(.text+0x62c): multiple definition of `ChangeNumbering__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o):grsetup.c:(.text+0x0): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `ChangeNumbering__' changed from 2820 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o) to 692 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o): In function `ChangeNumberingMesh__': grsetup.c:(.text+0x8e0): multiple definition of `ChangeNumberingMesh__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o):grsetup.c:(.text+0xb04): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `ChangeNumberingMesh__' changed from 2824 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o) to 876 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o): In function `GraphRandomPermute__': grsetup.c:(.text+0xc4c): multiple definition of `GraphRandomPermute__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o):grsetup.c:(.text+0x2348): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `GraphRandomPermute__' changed from 356 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o) to 588 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o): In function `ComputeMoveStatistics__': grsetup.c:(.text+0xe98): multiple definition of `ComputeMoveStatistics__' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o):grsetup.c:(.text+0x2060): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `ComputeMoveStatistics__' changed from 744 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libparmetis.a(grsetup.powerpc64-unknown-linux-gnu.opt.o) to 528 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libparmetis.a(grsetup.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `METIS_PartGraphKway2': parmetis.c:(.text+0x0): multiple definition of `METIS_PartGraphKway2' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0x1bc4): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `METIS_PartGraphKway2' changed from 560 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 320 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `METIS_WPartGraphKway2': parmetis.c:(.text+0x140): multiple definition of `METIS_WPartGraphKway2' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0x18e8): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `METIS_WPartGraphKway2' changed from 732 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 780 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `METIS_NodeNDP': parmetis.c:(.text+0x44c): multiple definition of `METIS_NodeNDP' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0x1118): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `METIS_NodeNDP' changed from 2000 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 1568 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `__MlevelNestedDissectionP': parmetis.c:(.text+0xa6c): multiple definition of `__MlevelNestedDissectionP' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0xb90): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `__MlevelNestedDissectionP' changed from 1416 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 1144 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `METIS_NodeComputeSeparator': parmetis.c:(.text+0xee4): multiple definition of `METIS_NodeComputeSeparator' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0x948): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `METIS_NodeComputeSeparator' changed from 584 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 580 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `METIS_EdgeComputeSeparator': parmetis.c:(.text+0x1128): multiple definition of `METIS_EdgeComputeSeparator' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0x6e4): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `METIS_EdgeComputeSeparator' changed from 612 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 740 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `METIS_mCPartGraphRecursive2': parmetis.c:(.text+0x140c): multiple definition of `METIS_mCPartGraphRecursive2' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0x42c): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `METIS_mCPartGraphRecursive2' changed from 696 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 868 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o): In function `__MCMlevelRecursiveBisection2': parmetis.c:(.text+0x1770): multiple definition of `__MCMlevelRecursiveBisection2' /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o):parmetis.c:(.text+0x0): first defined here /bgsys/drivers/V1R4M2_200_2010-100508P/ppc/gnu-linux/lib/gcc/powerpc-bgp-linux/4.1.2/../../../../powerpc-bgp-linux/bin/ld: Warning: size of symbol `__MCMlevelRecursiveBisection2' changed from 1068 in /home/bodner/software/libmesh_svn/contrib/lib/powerpc64-unknown-linux-gnu_opt/libmetis.a(parmetis.powerpc64-unknown-linux-gnu.opt.o) to 1012 in /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libmetis.a(parmetis.o) /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libpetsc.a(dlimpl.o): In function `PetscDLOpen': dlimpl.c:(.text+0xa0): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/bodner/software/libmesh_svn/lib/powerpc64-unknown-linux-gnu_opt/libmesh.a(perf_log.powerpc64-unknown-linux-gnu.opt.o): In function `libMesh::PerfLog::get_info_header() const': perf_log.C:(.text+0x2d88): warning: Using 'getpwuid' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking /home/bodner/software/petsc-3.2-p5/arch-bgp-ibm-opt/lib/libpetsc.a(send.o): In function `PetscOpenSocket': send.c:(.text+0x1d4): warning: Using 'gethostbyname' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking collect2: ld gab 1 als Ende-Status zurück make: *** [bin/amr-opt] Fehler 1 ------------------------------------------------------------------------------ RSA(R) Conference 2012 Save $700 by Nov 18 Register now 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