On Tue, Oct 27, 2015 at 9:56 PM, Jianfeng <jianfeng_...@hotmail.com> wrote:
> Hi > > I am new to libmesh, so maybe this problem is kind of stupid. > > I was compiling libmesh-0.9.4 with the configuration below > > ./configure --prefix=/opt/libmesh-master --enable-blocked-storage > --enable-triangle --enable-tetgen --enable-parmesh --enable-parmetis > --disable-strict-lgpl --enable-perflog --enable-nodeconstraint > --enable-unique-id --enable-ifem --enable-tracefiles > --with-mpi=/opt/mpich2 --enable-petsc PETSC_DIR=/opt/petsc-3.5.4 > --enable-complex > > There is no problem in the process of compilation, but when running > reduved_basis_ex6, there is some error shown below: > > [0]PETSC ERROR: --------------------- Error Message > -------------------------------------------------------------- > [0]PETSC ERROR: Argument out of range > [0]PETSC ERROR: New nonzero at (0,2) caused a malloc > Use MatSetOption(A, MAT_NEW_NONZERO_ALLOCATION_ERR, PETSC_FALSE) to turn > off this check > [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > for trouble shooting. > [0]PETSC ERROR: Petsc Release Version 3.5.4, May, 23, 2015 > [0]PETSC ERROR: > > /home/yanincha/Downloads/libmesh-master/examples/reduced_basis/reduced_basis_ex6/.libs/lt-example-dbg > on a arch-linux2-c-opt named dreamline by yanincha Tue Oct 27 22:19:16 2015 > [0]PETSC ERROR: Configure options --prefix=/opt/petsc-3.5.4 > --with-shared-libraries --with-mpi-dir=/opt/mpich2/ > --with-valgrind-dir=/opt/valgrind --with-scalar-type=complex > --download-fblaslapack --with-debugging=0 > [0]PETSC ERROR: #1 MatSetValues_SeqBAIJ() line 2191 in > /home/yanincha/Downloads/petsc-3.5.4/src/mat/impls/baij/seq/baij.c > [0]PETSC ERROR: #2 MatSetValues() line 1135 in > /home/yanincha/Downloads/petsc-3.5.4/src/mat/interface/matrix.c > > Any suggestions to fix it? > libmesh-0.9.4 was tagged on Feb 19, 2015, while PETSc 3.5.4 came out in May 23, 2015, so it's actually a nice surprise that this configuration actually compiles... I'd try the github master instead, and see if that works... -- John ------------------------------------------------------------------------------ _______________________________________________ Libmesh-users mailing list Libmesh-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/libmesh-users
