Hi I installed libmesh with the following configure options ./configure --prefix=/nobackup/vjayara1/codes/dtkmesh --enable-tecplot --enable-trilinos --enable-dtk --with-trilinos=/nobackup/vjayara1/codes/trilinos_install --with-dtk=/nobackup/vjayara1/codes/trilinos_install --enable-default-comm-world --with-cxx=`which mpicxx` --with-cc=`which mpicc` --with-fc=`which mpif90` --with-tbb=/nasa/intel/Compiler/2015.0.090/composer_xe_2015.0.090/tbb --with-tbb-lib=/nasa/intel/Compiler/2015.0.090/composer_xe_2015.0.090/tbb/lib/intel64/gcc4.4
The installation proceeded without any error. However, when I tried to run mesh_transfer example/simple_DTK example. I am getting the message Configuring libMesh with "--enable-trilinos" is required to run this example. I have installed trilinos with DTK and when I configure libmesh, towards the end, it does tell Trilinos ---- yes DTK ------ yes I am not sure what is the issue preventing me from running this example. In addition, when I run make check , I get the following error. Assembling the System [0]PETSC ERROR: ------------------------------------------------------------------------ [0]PETSC ERROR: Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range [0]PETSC ERROR: Try option -start_in_debugger or -on_error_attach_debugger [0]PETSC ERROR: or see http://www.mcs.anl.gov/petsc/documentation/faq.html#valgrind [0]PETSC ERROR: or try http://valgrind.org on GNU/linux and Apple Mac OS X to find memory corruption errors [0]PETSC ERROR: configure using --with-debugging=yes, recompile, link, and run [0]PETSC ERROR: to get more information on the crash. [0]PETSC ERROR: --------------------- Error Message -------------------------------------------------------------- [0]PETSC ERROR: Signal received [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html for trouble shooting. [0]PETSC ERROR: Petsc Release Version 3.7.2, unknown [0]PETSC ERROR: /nobackupp2/vjayara1/codes/libmesh/examples/fem_system/fem_system_ex1/.libs/example-opt on a icc_2015.0.090openmp_1.6.5 named pfe22 by vjayara1 Wed Jun 15 18:35:52 2016 [0]PETSC ERROR: Configure options --with-cxx=/nasa/openmpi/1.6.5/intel/bin/mpicxx --with-cc=/nasa/openmpi/1.6.5/intel/bin/mpicc --with-fc=/nasa/openmpi/1.6.5/intel/bin/mpif90 --with-shared-libraries --with-debugging=0 --with-blas-lapack-lib="-L/nasa/intel/Compiler/2015.0.090/composer_xe_2015.0.090/mkl/lib/intel64 -Wl,-rpath,/nasa/intel/Compiler/2015.0.090/composer_xe_2015.0.090/mkl/lib/intel64 -lmkl_intel_lp64 -lmkl_sequential -lmkl_core" --download-hypre=yes --with-openmp=1 [0]PETSC ERROR: #1 User provided function() line 0 in unknown file -------------------------------------------------------------------------- MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD with errorcode 59. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. Any suggestions on how to avoid this error. Thanks for patiently helping me out Regards Vegnesh ------------------------------------------------------------------------------ What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic patterns at an interface-level. Reveals which users, apps, and protocols are consuming the most bandwidth. Provides multi-vendor support for NetFlow, J-Flow, sFlow and other flows. Make informed decisions using capacity planning reports. http://pubads.g.doubleclick.net/gampad/clk?id=1444514421&iu=/41014381 _______________________________________________ Libmesh-users mailing list Libmesh-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/libmesh-users
