On Tue, 4 Mar 2008, Paul A. Rubin wrote:
For many plots in a sub directory "PlotFigures", I have 2 versions, one in eps version and one in pdf version.
Have you tried specifying a clipping region in LyX? Might be there's an issue with reading the bounding box info from the PDF (or EPS) (or both).
I often need to clip pdf images when inserted into a LyX/LaTeX document. Also, when there's a .pdf in the document I use pdflatex to view it as well as when generating the final output. Rich -- Richard B. Shepard, Ph.D. | Integrity Credibility Applied Ecosystem Services, Inc. | Innovation <http://www.appl-ecosys.com> Voice: 503-667-4517 Fax: 503-667-8863