On 2012-12-9 14:42 , Ryan Schmidt wrote:
> On Dec 8, 2012, at 17:26, Jeremy Huddleston Sequoia wrote:
> 
>> On Dec 7, 2012, at 1:50 PM, "Yao, Xiaolan" wrote:
>>
>>> I installed Pymol and the APBS plugin using MacPorts.  I  tried to
>>> run APBS calculations within Pymol, but it didn't give the proper
>>> output and I think the following message might be the reason:
>>>
>>> dyld: Library not loaded: libmaloc.dylib
>>>
>>> What should I do to solve this problem?
>>>
>>> Also, I have noticed when I try to use the APBS plugin to display
>>> surface electrostatic potential calculated from PDB2PQR server, it is not 
>>> displayed properly. I don't
>>> know if there two problems are related.
>>
>> malloc is provided by libSystem.  What is actually linking against 
>> libmalloc.dylib?  Can you provide the entire crash report?
> 
> I thought it was a typo at first too, but there actually is something called 
> libmaloc with one l:
> 
> http://fetk.org/codes/maloc/
> 
> I don't think we have it in MacPorts though, or if we do, it's being bundled 
> with another port.

APBS uses FEtk, according to its homepage.

- Josh
_______________________________________________
macports-users mailing list
[email protected]
http://lists.macosforge.org/mailman/listinfo/macports-users

Reply via email to