Dear MARMAM community,
My coauthors and I are pleased to announce publication of our paper, ‘Genetic, 
Endocrine, and Microbiological Assessments of Blue, Humpback and Killer Whale 
Health using Unoccupied Aerial Systems’.
Shannon Atkinson, Andrew Rogan, C. Scott Baker, Ralf Dagdag, Matthew Redlinger, 
Jennifer Polinski, Jorge Urban, Angie Sremba, Maile Branson, Kendall Mashburn, 
Logan Pallin, Amy Klink, Debbie Steel, Eric Bortz, and Iain Kerr
You can find the article here: https://doi.org/10.1002/wsb.1240
Unoccupied aerial system (UAS) technologies applied to health assessments of 
large whales can have positive implications for progressive management. We 
focused on the collection of cetacean respiratory blow samples for endocrine, 
DNA profiling, microbial metabarcoding, and metagenomics analyses, with the 
goal of improving management of large whale populations. Blow samples were 
collected from humpback (Megaptera novaeangliae, n = 109 samples analyzed), 
blue (Balaenoptera musculus, n = 21 samples analyzed), and killer whale 
(Orcinus orca, n = 1 sample analyzed) species, as well as the responses of the 
whales to the collection of their blow by UAS. Endocrine analyses were 
validated for 5 steroid hormones in humpback whales and 4 hormones in blue 
whales. For DNA profiling, we attempted to extract and amplify nuclear and 
mitochondrial DNA, resulting in sequencing of mtDNA haplotypes for 54% of 
samples, identification of sex for 39%, and individual identification by 
microsatellite genotyping for 17%. The DNA profiles of 2 of the blow samples 
from humpback whales were matched to a DNA register for this regional 
population. Metagenomic and microbial metabarcoding classifications found a 
diverse number of bacteria, eukaryotes, and viruses in humpback whale blow. 
Although a significant portion of classifications were found in both seawater 
and blow, several of the most abundant organisms were present only in blow 
samples, suggesting they are true members of the respiratory microbiome. A 
comprehensive integration of laboratory-based approaches using noninvasive UAS 
collection technologies could become an important management tool for health 
assessments of large cetaceans, especially for species listed as endangered. 
The addition of individual and population-level health assessments to currently 
practiced stewardship of large whales, renders them as excellent sentinels of 
ocean health.
Please feel free to contact us at [email protected]<mailto:[email protected]>
Best,
Andy Rogan
Ocean Alliance
32 Horton St
Gloucester MA 01930

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