Hi Mathew With reference to both the threads, one for DAS 'dasRegionFeature' and the other one for installation, I do not know how can you query DAS server if you are getting problems during install. for dasRegionFeature, you probably have the latest up to date code and secondarily if you are having install level problems, the rest should not work anyways. I would say, check out a latest copy under windows, and please try it from the beginning and use this registry instead
perl bin/configure.pl -r conf/martDBLocation.xml --clean For the error, if you get this again: Connecting to localhost[127.0.0.1]:9002... failed: Connection refused. could you please send me the contents of error_log and httpd.conf once you have done this from start. also please check if you do not have to set proxy env. variable for wget on your network. Cheers syed On Sat, 2007-07-07 at 10:53 +1000, Matthew Hobbs wrote: > Thanks for trying to help. > > Syed Haider wrote: > > your XMLs look fine to me, the attribute (chrStart) does exist. > > good! > > Just > > to further your testing, I would say instead of chrStart use chrEnd > > twice and see if it works. your exportable's attributes key would look > > like: > > > > attributes = symbol_list,chrEnd,chrEnd,orientation > > done > > > > I know it will fetch incorrect data but for debugging on your XML, would > > be helpful. and please do a --clean run of configure script every time > > you change your XML, followed by a kill and restart of your apache to > > see the changes. > > hope this helps. > > Now get this: > > Attribute 'chrEnd' not found in dataset default.btaurus > > Matthew -- ====================================== Syed Haider. EMBL-European Bioinformatics Institute Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK. ======================================
