cd ~/.biomart
Rinse and repeat. Alright! It works! Now I have a martview with my own
mart in it.
A small note:
The apache start command in step 3.3 does not work if you are already
running apache, since port 80 (not 5555) is already taken:
> $ /usr/sbin/apache2 -d `pwd`
apache2: Could not reliably determine the server's fully qualified domain name,
using 127.0.1.1 for ServerName
(13)Permission denied: make_sock: could not bind to address 0.0.0.0:80
no listening sockets available, shutting down
Unable to open logs
However doing as in step 2.4.4 does work:
/usr/sbin/apache2 -d $PWD -f $PWD/conf/httpd.conf
An even smaller note:
Martbuilder does not protest if the original table has no primary key.
SQL is generated with no problem. But then marteditor chokes when
following the steps in 3.2 "Configuration using MartEditor", right when
I press "Naive". Starting over with a table that has a primary key fixes
that though. (not sure if it's that big a deal really, but I thought I
should mention it...)
Thanks for your help!
/Joel Hedlund
