Hi all, I was testing a biomart query and trying to get the following reactome *reaction*:
http://www.reactome.org/cgi-bin/eventbrowser?DB=gk_current&ID=485887 I was doing this in reactome by searching reactome for the UniProt Accession P38147 (please note that in Biomart this seems to be erroneously called a Uniprot ID). Reactome's own search pages find this reaction when searching only using that uniprot ID. However, when I use the query below in biomart.org, I get no results. Can anyone help me figure out what I'm doing wrong? <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE Query> <Query virtualSchemaName = "default" formatter = "TSV" header = "0" uniqueRows = "0" count = "" datasetConfigVersion = "0.6" > <Dataset name = "reaction" interface = "default" > <Filter name = "referencepeptidesequence_uniprot_id_list" value = "P38147"/> <Attribute name = "stableidentifier_identifier" /> <Attribute name = "reaction_db_id" /> <Attribute name = "_displayname" /> <Attribute name = "species__displayname" /> </Dataset> </Query> Thanks, Allyson -- Allyson Lister http://lurena.vox.com CISBAN, http://www.cisban.ac.uk Newcastle University
