Hello Syed, First of all, I mean of course annotated_feature template config in my previous post.
2009/9/7 Syed Haider <[email protected]>: > could you please write a details on which tables you have added, names > please ? I have added a table 'mscript_ann_fea_blast_cdna' table to the various species, which links to the annotated features by its column 'annotated_feature_id'. I then run MartBuilder, update all schemas, build & execute the SQL. There is plenty of data in the human and mouse mart-tables, but the fruit-fly's table dmelangoaster_regulatory_feature__mscript_ref_fea_blast_cdna__dm is empty. > what did you do to add this info in MartEditor? please write the series of > steps. In MartEditor I import the meta-info from martdb.ensembl.org and export it to my mart, then do the following: 1. connect to my mart 2. run 'Update All' 3. 'Import' where I choose annotated_feature 4. have a look at the attributes to see if there is a new collection with new attributes 5. 'Export' Then I run 'perl bin/configure.pl --clean -r conf/myMart.xml'. It is peculiar that the web-interface will not change even when I edit entries in MartEditor which are displayed in the browser. I wonder where the data comes from.. Thanks, Joachim -- B.1079 Michael Smith Building Faculty of Life Sciences The University of Manchester Oxford Road Manchester M13 9PT United Kingdom
