Hi Joachim:
The steps you mentioned sound correct. However, you didn't mention restarting
Apache. Could you please verify that you'ved stopped/restarted Apache?
If the changes you made through MartEditor still don't show in the web browser,
please send us the XML from your mart ("Save all" in MartEditor). We'll take a
look.
Regards,
Christina
> -----Original Message-----
> From: [email protected]
> [mailto:[email protected]] On Behalf Of Joachim Baran
> Sent: Monday, September 07, 2009 11:03 AM
> To: Syed Haider
> Cc: [email protected]
> Subject: Re: [mart-dev] Features visible in MartEditor, but
> they are not displayed in the web-interface
>
> Hello Syed,
>
> First of all, I mean of course annotated_feature template config in my
> previous post.
>
> 2009/9/7 Syed Haider <[email protected]>:
> > could you please write a details on which tables you have
> added, names
> > please ?
> I have added a table 'mscript_ann_fea_blast_cdna' table to the various
> species, which links to the annotated features by its column
> 'annotated_feature_id'. I then run MartBuilder, update all schemas,
> build & execute the SQL. There is plenty of data in the human and
> mouse mart-tables, but the fruit-fly's table
> dmelangoaster_regulatory_feature__mscript_ref_fea_blast_cdna__dm is
> empty.
>
> > what did you do to add this info in MartEditor? please
> write the series of
> > steps.
> In MartEditor I import the meta-info from martdb.ensembl.org and
> export it to my mart, then do the following:
> 1. connect to my mart
> 2. run 'Update All'
> 3. 'Import' where I choose annotated_feature
> 4. have a look at the attributes to see if there is a new collection
> with new attributes
> 5. 'Export'
>
> Then I run 'perl bin/configure.pl --clean -r conf/myMart.xml'.
>
> It is peculiar that the web-interface will not change even when I edit
> entries in MartEditor which are displayed in the browser. I wonder
> where the data comes from..
>
> Thanks,
> Joachim
>
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