Does anyone know of a script like this available?
On May 26, 2014 1:29 PM, "Aaron Darling" <aaron.darl...@uts.edu.au> wrote:
> Hello Kai,
>
> On Thu, 2014-05-08 at 07:54 +1000, Zhou, K (mmb) wrote:
>
>
> > We recently wanna fish the unique sequences from a set of genomes. Is
> > there any script can do this task after alignment by Mauve?
> >
> There isn't any script to do this within the Mauve software
> independently of annotations, however, you could write a very simple
> script to parse the backbone file and the relevant input sequence to
> extract such regions of interest.
>
> Best,
> -Aaron
> --
> Aaron E. Darling, Ph.D.
> Associate Professor, ithree institute
> University of Technology Sydney
> Australia
>
> http://darlinglab.org
> twitter: @koadman
>
>
>
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