Hi,
I'm wondering if anything has changed between versions 1 and 2 for the
mauveAligner algorithm? I'm updating some software that used mauveAligner
v1.2.3 to identify islands and I'm noticing that v2.3.1 produces a handful more
islands. Is this because the alignment was different/better? I was under the
impression that the new and improved alignment algorithm was implemented under
progressiveMauve and that mauveAligner was the same as previous versions. It
would be really helpful if you could confirm that these differences are
expected and are improvements from the older version and not the result of
something I may be misinterpreting.
Thank you,
Bhav
--
Bhavjinder Kaur Dhillon
CIHR/MSFHR Bioinformatics PhD Candidate
Brinkman Laboratory, MBB Department
Simon Fraser University, Burnaby BC, Canada, V5A 1S6
Phone: 778-782-5414 Fax: 778-782-5583
------------------------------------------------------------------------------
Infragistics Professional
Build stunning WinForms apps today!
Reboot your WinForms applications with our WinForms controls.
Build a bridge from your legacy apps to the future.
http://pubads.g.doubleclick.net/gampad/clk?id=153845071&iu=/4140/ostg.clktrk
_______________________________________________
Mauve-users mailing list
Mauve-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/mauve-users
