Hi,
Can anyone tell me how to fix this error? Below is the error message:
done.
root alignment has 2 superintervals
root alignment length: 2273551
Organisms have 42.5% GC
Completed without error.
Alignment complete!
file:/Applications/Mauve/Mauve.app/Contents/Resources/Java/Mauve.jar!/images/Dcj16.gif
2 LCBs before splitting with getSplitLCBs(XmfaViewerModel).
starting with 1 LCBs
Exception in thread "Thread-14" java.lang.IllegalArgumentException: col
== 83292 : greater than LCB length (length == 5852)
at org.gel.mauve.analysis.PermutationExporter.cropLeft(Unknown Source)
at
org.gel.mauve.analysis.PermutationExporter.splitLCBbyGenome(Unknown Source)
at org.gel.mauve.analysis.PermutationExporter.splitLcbList(Unknown
Source)
at org.gel.mauve.analysis.PermutationExporter.getSplitLCBs(Unknown
Source)
at org.gel.mauve.XmfaViewerModel.init(Unknown Source)
at org.gel.mauve.XmfaViewerModel.<init>(Unknown Source)
at org.gel.mauve.ModelBuilder.buildModel(Unknown Source)
at org.gel.mauve.gui.FrameLoader.loadFile(Unknown Source)
at org.gel.mauve.gui.FrameLoader.run(Unknown Source)
at java.lang.Thread.run(Thread.java:695)
Thanks,
Tina
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