Dear Aaron,
Here I copi the lines correspondent to a new exited error while starting an
alignment of bacterial genomes.
Thank you in advance for the tip to solve it.
Cristina
-------
Running alignment.
Executing
/Applications/Mauve 2.4.0/Mauve.app/Contents/MacOS/progressiveMauve
--output=/Users/Buthercup_ch/酢:Su/ 酢:Su-Projects/Genome
Comparison/DDBJ_WGS/Ref Genomes/Kmedellinensis (old + updated)
--output-guide-tree=/Users/Buthercup_ch/酢:Su/ 酢:Su-Projects/Genome
Comparison/DDBJ_WGS/Ref Genomes/Kmedellinensis (old + updated).guide_tree
--backbone-output=/Users/Buthercup_ch/酢:Su/ 酢:Su-Projects/Genome
Comparison/DDBJ_WGS/Ref Genomes/Kmedellinensis (old + updated).backbone
/Users/Buthercup_ch/酢:Su/ 酢:Su-Projects/Genome Comparison/DDBJ_WGS/Ref
Genomes/Kmedellinensis.gb
/Users/Buthercup_ch/酢:Su/ 酢:Su-Projects/Genome Comparison/DDBJ_WGS/Ref
Genomes/Kmeddellinensis_updated7-5-15.gb
Storing raw sequence at
/var/folders/sr/w5fjtzj91t72f0kjm0s3ny9m0000gn/T/rawseq4691.000
Sequence loaded successfully.
/Users/Buthercup_ch/酢:Su/ 酢:Su-Projects/Genome Comparison/DDBJ_WGS/Ref
Genomes/Kmedellinensis.gb 3136818 base pairs.
Storing raw sequence at
/var/folders/sr/w5fjtzj91t72f0kjm0s3ny9m0000gn/T/rawseq4691.001
libc++abi.dylib: terminating with uncaught exception of type
std::ios_base::failure: failed mapping file: Invalid argument
Exited with error code: 134
---------
------------------------
Cristina Andres-Barrao, PhD.
[email protected]
Laboratory of Fermentation Biochemistry
Department of Fermentation Sciences
Faculty of Applied Biosciences
Tokyo University of Agriculture
1-1-1 Sakuragaoka, Setagaya-ku
Tokyo 156-8502, Japan
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