For some reason, the ubuntu version of h5utils provided with apt-get install h5utils does not have internally consistent paths/libraries for the colormaps.
A temporary solution is the following: To convert the file foo.h5 into foo.png with colormap foomap h5topng -c /usr/share/h5utils/colormaps/foomap foo.h5 This is ugly, but it works, and you can go about your work. You could make an alias or script to wrap this up nicely, but I'll check my own computer for config files to see if there's a more elegant solution. Note: This thread is essentially a duplication of http://ab-initio.mit.edu/pipermail/meep-discuss/2008-August/002067.html <http://ab-initio.mit.edu/pipermail/meep-discuss/2008-August/002052.html> to which I've posted the same reply. Matt On Wed, Aug 20, 2008 at 7:45 PM, Matt Eichenfield <[EMAIL PROTECTED]> wrote: > To whom it may concern: > > I have seen that h5utils version 1.11.1 fixes a bug in version 1.11 wherein > the program fails to find colormaps in h5topng. However, I am having the > same problem using h5utils version 1.10-7ubuntu1, which I'm assuming is > h5utils version 1.10. I got this version using apt-get install h5utils on > August 20, 2008. > > Here are a couple examples of errors: > > $ h5topng -RZc dkbluered -C ring-eps-000000.00.h5 ring-ez-*.h5 > Could not find colormap "dkbluered" > > $ h5topng -R -C ring-eps-000000.00.h5 ring-ez-*.h5 > Could not find colormap "gray" > > Should I just remove h5utils using apt-get and "manually" install version > 1.11? Is this a known issue in versions earlier than 1.11 as well? > > Thanks, > Matt Eichenfield >
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