Hello All,
Just finished an install on a CentOS 6.6 cluster. One notable flaw: Meep failed the three_d test during make check. I installed meep-mpi (1.3), mpb-mpi (1.5), and h5utils (1.12.1). I used guile-1.8.8, as the 2.0 versions did not build on my system. Dependencies were installed by source to $HOME, as I did not have root privileges, so I'll post these install notes separately for future reference. This turned out to be quite the project! Anyway, any idea why three_d fails? What does this exactly mean, and how cautious should I be in running simulations? Here's the test log and my system info: System info: Linux version 2.6.32-504.16.2.el6.x86_64 (mockbu...@c6b9.bsys.dev.centos.org) (gcc version 4.4.7 20120313 (Red Hat 4.4.7-11) (GCC) ) #1 CentOS release 6.6 ==================================== meep 1.3: tests/test-suite.log ==================================== # TOTAL: 19 # PASS: 18 # SKIP: 0 # XFAIL: 0 # FAIL: 1 # XPASS: 0 # ERROR: 0 .. contents:: :depth: 2 FAIL: three_d ============= Using MPI version 3.0, 4 processes Testing 3D... Testing pml quality... Got newE/oldE of 1.66447e-05 Got newE/oldE of -3.83624e-08 Got newE/oldE of 2.1382e-09 Periodic test using 2 chunks... Periodic test using 3 chunks... Periodic test using 4 chunks... Periodic test using 5 chunks... Periodic test using 6 chunks... Metal test using 2 chunks... Metal test using 3 chunks... Metal test using 4 chunks... Metal test using 5 chunks... Metal test using 6 chunks... Metal test using 7 chunks... Testing pml while splitting into 2 chunks... meep: error in test_pml_splitting vacuum ex differs: -2.15209e-16 -9.45105e-17 out of 1.11568e-07 -6.03441e-08 This comes out to a fractional error of 1.85307e-09 Right now I'm looking at 1.3 0.3 0.15, time 18.55 -------------------------------------------------------------------------- MPI_ABORT was invoked on rank 3 in communicator MPI_COMM_WORLD with errorcode 1. NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes. You may or may not see output from other processes, depending on exactly when Open MPI kills them. -------------------------------------------------------------------------- meep: error in test_pml_splitting vacuum meep: error in test_pml_splitting vacuum meep: error in test_pml_splitting vacuum [sfstar2.sfsu.edu:12802] 3 more processes have sent help message help-mpi-api.txt / mpi-abort [sfstar2.sfsu.edu:12802] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages
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