Hi Derek, Unfortunately, it is happening with any program that tries to open an hdf5 file. What is strange is that the identical installation procedure with this version of HDF5 worked with no problem in July 2017, and now it does not. On the iMac I tried installing HDF5 via Homebrew (one of the Mac package handlers), but the compiler complains of “unknown symbols” in that case….the reason probably being that Homebrew always installs the latest version of any software, not HDF5-1.8.14, and that the latest version is incompatible with the compiler.
Best regards, John > On 31 Jul 2018, at 04:30, Derek Kita <dk...@mit.edu> wrote: > > This can happen if you are trying to call "load-flux" in scheme (or > load_flux() in python), but the file you are trying to load just doesn't > exist. Like if you ran the waveguide bend tutorial example without first > running the normalization. > > Best, > Derek > > On Mon, Jul 30, 2018 at 4:25 PM John Weiner <johwei...@gmail.com > <mailto:johwei...@gmail.com>> wrote: > Dear meep users and maintainers, > > During the last week I have had to reinstall a working meep/h5utils on both a > pc box running ubuntu 17.10 and on an iMac running macOS High Sierra (version > 10.13.6). Meep and all its dependencies seem to install ok following the > instructions posted by Ardavan on Wed. 26 July 2017 four ubuntu (and an > adaptation of them for the macOS). However now I see on both operating > systems the same error when meep tries to open an hdf5 file. The first error > one sees is shown below. Configure can find the hdf5 library and the "make > check” of hdf5-1.8.14 passes all its tests. > > If anybody has a clue as to what is going on here, I would be grateful for > any suggestions. > > Best regards > > John > > HDF5-DIAG: Error detected in HDF5 (1.8.14) thread 0: > #000: H5F.c line 604 in H5Fopen(): unable to open file > major: File accessibilty > minor: Unable to open file > _______________________________________________ > meep-discuss mailing list > meep-discuss@ab-initio.mit.edu <mailto:meep-discuss@ab-initio.mit.edu> > http://ab-initio.mit.edu/cgi-bin/mailman/listinfo/meep-discuss > <http://ab-initio.mit.edu/cgi-bin/mailman/listinfo/meep-discuss>
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