Hey all, I'm trying to add enzymes to ApE (A Plasmid Editor, see here: http://biologylabs.utah.edu/jorgensen/wayned/ape/ ) through whatever means will work.
However, the manual-addition system bugs out, not that I'm even sure how it's supposed to work (what's the syntax for the cutting site, etc?). It supposedly imports DNA Strider files, but where are these available, or what syntax/format are they written in so I can write some manually? It's suggested on the very sparse FAQ that enzymes can be added manually to the default enzymes file, but the file is a mess when opened in Notepad, with no clear structure or syntax. Given how much time I've spent designing DNA in ApE I'd hate to have to make copy/pasting into external tools part of the workflow, and there are only 10 enzymes I need to add in this case. Does anyone else have experience with either DNA strider enzyme definition files, or with ApE itself? Thanks! Cathal -- letters.cunningprojects.com twitter.com/onetruecathal http://www.indiebiotech.com _______________________________________________ Methods mailing list [email protected] http://www.bio.net/biomail/listinfo/methods
