Hi Caspar,
Thanks, that will work - I missed that tool.
Best,
Isaiah
On Tue, Mar 12, 2013 at 6:03 AM, Goch, Caspar Jonas <
[email protected]> wrote:
> Hi Isaiah,****
>
> ** **
>
> MITK Diffusion does not currently support splitting mosaic files. You
> might want to consider using gdcmtar to split these before loading in MITK
> (using the --mosaic option[1]).****
>
> ** **
>
> Regards,****
>
> Caspar****
>
> ** **
>
> [1] http://gdcm.sourceforge.net/html/gdcmtar.html****
>
> ** **
>
> *Von:* Isaiah Norton [mailto:[email protected]]
> *Gesendet:* Dienstag, 12. März 2013 00:33
> *An:* [email protected]
> *Betreff:* [mitk-users] MITK Diffusion with mosaic****
>
> ** **
>
> Hi,****
>
> ** **
>
> I am testing MITK Diffusion 2012.12 with a 64-direction diffusion dataset
> acquired with a Siemens scanner and stored in mosaic-style DICOM. The DICOM
> files are imported successfully, but the mosaic layout is maintained -- for
> example the B0 remains as collection of slices in one 2D plane. DTI
> reconstruction appears to work, but tractography does not (understandably
> so).****
>
> ** **
>
> Am I overlooking an option to properly split Mosaic files?****
>
> ** **
>
> Thanks,****
>
> Isaiah****
>
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