> But can one give a fast answer if ITK has filters? I think VTK has no filters > to my knowledge.....
https://itk.org/Doxygen413/html/group__ImageFilters.html > Is there some place in the code where segmentation is governed central? > Short question: I conclude that there are different segmentation methods > implemented? MITK has around 2 million lines of code and segmentation is a substantial part of it, so, yes there is a central place but it would strongly recommend to start as a user and look into the segmentation plugin. The segmentation code is located in the Modules and Plugins subfolders that contain "Segmentation" in their name. > I am only interested in meshes as output. So surface meshes are possible and > can be exported as e.g. triangles or also with other basic elements? Yes, triangles. > So I can load dicoms, filter them with some filters, segment, create a > surface mesh and export it for further use? Do I understand correct? Yes, you probably have to program your MITK cmdline app or plugin to put together your ITK filter pipeline. Everything else is already available in the MITK workbench installers. If you only want to do simple filtering there's a good chance that it's already implemented in the "Basic Image Processing" plugin (http://docs.mitk.org/2018.04/org_mitk_views_basicimageprocessing.html). It is not enabled in our installers though and you would have to build MITK and enable the plugin. _______________________________________________ mitk-users mailing list mitk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mitk-users
