Yes, intern ally we are using short as pixel type. This probably caused the issue. Good to hear that you solved it.
Cheers, Peter ________________________________________ Von: Marek Dostál <424...@mail.muni.cz> Gesendet: Montag, 8. Juni 2020 06:26 An: Neher, Peter Betreff: Re: [mitk-users] DWI import problem Hi Peter, I solved this problem. When I divided image by 10 it looks right. There was a problem with image type I supposed. Thanks Mark "Neher, Peter" <p.ne...@dkfz-heidelberg.de> wrote on Thu, 4 Jun 2020 22:21:03 +0000: > Dear Marek, > > Are you opening the spherical harmonic data (the csf result) or raw dwi > data? Where does it come from? Could you send me a sample > dataset? > > I am on vacation but I will have a look next week. > > Cheers, > Peter > > > ________________________________ > Von: Marek Dostál <424...@mail.muni.cz> > Gesendet: Donnerstag, 4. Juni 2020 13:06 > An: mitk-users@lists.sourceforge.net; mitk-users-requ...@lists.sourceforge.net > Betreff: [mitk-users] DWI import problem > > Dear MITK users, > > when I open DWI data ( *.nii.gz) CSF has negative values (aprox. -24000). > When I open the same file in ITK-SNAP there voxels have normal values (2000 > - > 15000) in whole volume. > > Could you help me why? > > Thank you > > Best regards, > > Mark > > > _______________________________________________ > mitk-users mailing list > mitk-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/mitk-users _______________________________________________ mitk-users mailing list mitk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mitk-users
