Hi Jinhao, I assume you are using MITK v2023.12?
Using Segment Anything has a few prerequisites and requires some installation to be done. Details can be found the in the user manual [1]. The GrowCut (variant of GraphCut) tool is still available. It is listed in the 3D tools tab, not in the 2D tools tab. You find it also in the user manual [2]. In 3-5 weeks, the next version of MITK will be released with many improvements regarding segmentation. Also, a new tool "MedSAM" will be introduced, which is a variant of Segment Anything specifically tailored for medical images. Best regards, Stefan [1] https://docs.mitk.org/2023.12/org_mitk_views_segmentation.html#org_mitk_views_segmentationSegmentAnything [2] https://docs.mitk.org/2023.12/org_mitk_views_segmentation.html#org_mitk_views_segmentation3dgrowcuttool ________________________________________ Von: Wang Jinhao <jinhao.w...@hest.ethz.ch> Gesendet: Montag, 6. Mai 2024 17:45 An: mitk-users@lists.sourceforge.net Betreff: [Extern] - [mitk-users] Inquire about MITK auto match Dear All, I am using the current version of MITK and trying to follow a old pipeline in our group for doing bone segmentation. In the old version, there is a graphcut (semi auto) segmentation method available but now I cannot see it. So what kind of semi-auto or auto segmentation method do we have now? Also, I tried the Segment anything method but when I press the button to give label nothing happens. Does anyone know whats the quickest way to do segmentation using MITK. Best, Jinhao _______________________________________________ mitk-users mailing list mitk-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mitk-users
