Those two formats are identical. It should be fine. If you run ALPACA in the batch mode, it will write the landmark estimates in fcsv format for you in the folder you specified. Single Mode is to allow exploring the parameters.
On Monday, December 13, 2021 at 12:36:57 PM UTC-8 [email protected] wrote: > > I was able to visualize the landmarks on the warped source mesh but > despite I cant download the landmarks as Fiducial .csv I saved those points > using MarkupsFiducial .csv. Can I use those points in a GPSA? I mean in > which format must the points be saved to run a GPSA? Thanks for your > response. > > [image: image.png] > > > <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> > Libre > de virus. www.avg.com > <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> > > <#m_1905771478770677934_DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2> > > El lun, 13 dic 2021 a las 16:57, Murat Maga (<[email protected]>) > escribió: > >> Pablo, >> >> I downloaded the version you reference, install SlicerMorph and run one >> mouse sample as a test, and everything worked out as expected. There might >> be subtle differences between the menus in the tutorials and the version >> you are running, but I am not seeing any issues. You should be able to >> export the "Refined Predicted LMs" as a fcsv file by right clicking on in >> and choosing export as. However, what I am guessing something in the steps >> didn't complete successfully. It might be helpful to open the python >> interactor window and see whether there are any errors reported. >> >> >> >> On Monday, December 13, 2021 at 11:35:17 AM UTC-8 [email protected] >> wrote: >> >>> Dear All, >>> >>> I'm trying to use ALPACA but for some strange reason, I couldn’t even >>> run the example. I noted some differences between the files/results I >>> obtained and those included on 'Tutorials/ALPACA at main · >>> SlicerMorph/Tutorials · GitHub. I'm using the 3D Slicer 4.13.0-2021-12-10' >>> and I downloaded the Preview Release version (Revision 30497). First I >>> noted that the Select subsampling voxel size option does not appear. In >>> addition, the resulting landmarks named Refined predicted landmarks are not >>> Fiducials and these resulting points cant be visualized on the model or >>> saved. During the run CPD non-rigid registration, the points do not appear >>> on the model. So, I’m not sure what I’m doing wrong. Thanks for the advice. >>> >>> All best, >>> >>> Paolo >>> >>> >>> <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> >>> Libre >>> de virus. www.avg.com >>> <http://www.avg.com/email-signature?utm_medium=email&utm_source=link&utm_campaign=sig-email&utm_content=webmail> >>> >>> <#m_1905771478770677934_m_-688267068781395069_m_-3491729668570430268_DAB4FAD8-2DD7-40BB-A1B8-4E2AA1F9FDF2> >>> >> -- >> > You received this message because you are subscribed to the Google Groups >> "Morphmet" group. >> To unsubscribe from this group and stop receiving emails from it, send an >> email to [email protected]. >> To view this discussion on the web visit >> https://groups.google.com/d/msgid/morphmet2/bca1020f-21b4-41c0-9e50-d51289527fb8n%40googlegroups.com >> >> <https://groups.google.com/d/msgid/morphmet2/bca1020f-21b4-41c0-9e50-d51289527fb8n%40googlegroups.com?utm_medium=email&utm_source=footer> >> . >> > -- You received this message because you are subscribed to the Google Groups "Morphmet" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/morphmet2/ce45ab94-cb44-4fb5-9376-8b5746dbe05an%40googlegroups.com.
