Hi,

    there is no mistakes in your ctl.file. the only difference is when you tape 
the command h5topng -S 3 epsilon.h5 in your shell, then you got a line defect 
in the center of your structure ( see the attached epsilon1.png), but when you 
use mpb-data -r -m 3 -n 32 epsilon.h5, h5topng epsilon.h5:data-new, you will 
rectify the cell, expand it to three periods in each direction (see 
http://ab-initio.mit.edu/wiki/index.php/MPB_Data_Analysis_Tutorial), then you 
got the attached epsilon2.png.
   hope this help
    Best regards

--- On Tue, 12/28/10, 罗绪强 <[email protected]> wrote:

From: 罗绪强 <[email protected]>
Subject: Re: [MPB-discuss] Line-defect waveguide problem
To: [email protected]
Date: Tuesday, December 28, 2010, 7:40 PM

Thanks very much for your reply! 
The structure that i want to bulid is ONLY one line-defect in the whole square 
lattice.Even if I set the supercell parameter to 10, this line-defect is still 
periodic.That means the line-defect isn't sole.Like that:

 
oooo....
xxxx....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
xxxx....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
oooo....
xxxx....
oooo....

What I need is:
 
(Infinite oooo...)
oooo....

oooo....
xxxx....
oooo....
oooo....
(Infinite oooo...)
 
How to do it? Best regards.
 
2010/12/29 imanol andoni <[email protected]>

Dear friend, 
I think you have a mistake in  the supercell-y parameter. Your supercell width 
is 3 so MPB ensures a Bloch periodicity using a supercell composed by only 
three holes in y direction. You should probably try with:

(define-param supercell-y 10)
I'm waiting for hear from you. 


2010/12/27 <[email protected]>

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Today's Topics:

  1. Line-defect waveguide problem (???)


----------------------------------------------------------------------

Message: 1
Date: Mon, 27 Dec 2010 20:50:38 +0800
From: ??? <[email protected]>

Subject: [MPB-discuss] Line-defect waveguide problem
To: [email protected]
Message-ID:
       <[email protected]>

Content-Type: text/plain; charset="iso-8859-1"

Dear Prof. Johnson and Meep users,

Hi all! I am new learner of MPB software and poor in English.So please
forgive me for bad expression.
I am trying to to calculate the waveguide of the square lattice structure

that a line defect of the air holes on the epsilon.I use the
"line-defect.ctl" for reference. like below:

(define-param supercell-y 3) ; the (odd) number of lateral supercell periods
(set! geometry-lattice (make lattice

   (basis1 1 0)
   (basis2 0 1)
   (size 1 supercell-y no-size)))
(define-param r 0.2) ; the rod radius in the bulk crystal
(set! geometry (list (make cylinder
        (center 0 0 0) (radius r) (height infinity)

        (material (make dielectric (epsilon eps))))))
(set! geometry
     (append
      (geometric-objects-lattice-duplicates geometry)
      (list
 (make cylinder (center 0) (radius r) (height infinity)

      (material air)))))

then I got a result like that
o= holes
x=defcet
oooo....
xxxx....
oooo....
oooo....
xxxx....
oooo....
oooo....
xxxx....
oooo....

Here is the problem,the square lattice structure that I want to calculate is

ONLY one line-defect in that.That means the line-defect shall not be
periodic.Like below:

oooo....
oooo....
oooo....
oooo....
xxxx....
oooo....
oooo....
oooo....
oooo....

Could someone tell me how to write the ".ctl" fle? Really appreciate for

your great help!
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