Hi all,

    I've managed to install the binary distribution of mpiblast and NCBI
Toolbox.

     However, when I try to execute the following line:

 /usr/bin/mpirun -np 16 /usr/local/bin/mpiblast -d
/local/elizeu/human_genomic.00.nsq -i blast_query.fas -p blastn -o
blast_results.txt

     I got the following error message.

Sorry, mpiBLAST must be run on 3 or more nodes
aborting job:
application called MPI_Abort(MPI_COMM_WORLD, 0) - process 0


     The strange thing is that no matter which number of processors is
passed in the -np parameter I'll get this message.

      I've tried the same command line with the -t option to see which
procgroup file was being generated, and it is fine.

      Have you experience similar situation ?

      Thanks in advance,
      Eli



-------------------------------------------------------------------------
Take Surveys. Earn Cash. Influence the Future of IT
Join SourceForge.net's Techsay panel and you'll get the chance to share your
opinions on IT & business topics through brief surveys - and earn cash
http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV
_______________________________________________
Mpiblast-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/mpiblast-users

Reply via email to