jasonmox...@debian5-32:/tmp/jason/mpir-1.2/build_fat$ ls -l ../../sage-4.2.1/local/lib/libgmp.so.3.4.4 jay/lib/libgmp.so.3.4.6 -rwxr-xr-x 1 jasonmoxham jasonmoxham 508556 2009-11-15 09:20 jay/lib/libgmp.so.3.4.6 -rwxr-xr-x 1 jasonmoxham jasonmoxham 508556 2009-11-14 21:07 ../../sage-4.2.1/local/lib/libgmp.so.3.4.4 jasonmox...@debian5-32:/tmp/jason/mpir-1.2/build_fat$ diff ../../sage-4.2.1/local/lib/libgmp.so.3.4.4 jay/lib/libgmp.so.3.4.6 Binary files ../../sage-4.2.1/local/lib/libgmp.so.3.4.4 and jay/lib/libgmp.so.3.4.6 differ jasonmox...@debian5-32:/tmp/jason/mpir-1.2/build_fat$ LD_LIBRARY_PATH=/tmp/jason/mpir-1.2/build_fat/jay/lib/ gcc jay.c -o jayexe
so mpir-1.2 OK jasonmox...@debian5-32:/tmp/jason/mpir-1.2/build_fat$ LD_LIBRARY_PATH=/tmp/jason/sage-4.2.1/local/lib/ gcc jay.c -o jayexejay.c: In function âmainâ: jay.c:11: internal compiler error: Segmentation fault Please submit a full bug report, with preprocessed source if appropriate. See <file:///usr/share/doc/gcc-4.3/README.Bugs> for instructions. But sage mpir-1.2 NOT OK Looks like the way sage builds mpir-1.2 is wrong. I notice the soname numbers are different ? sage does patch mpir with ? , I'll look On Sunday 15 November 2009 17:18:53 Bill Hart wrote: > I'm not going to try and debug this issue in Sage. From my perspective > this could equally well be: > > 1) An issue in the Sage environment > 2) A bug in Pari > 3) A bug in gcc > 4) A bug in MPIR > > At the present moment I have tonsilitis and I am working very hard on > my FLINT project in anticipation of visiting Andy Novocin next week to > optimise his new factorisation code that he has written for FLINT. So > I just don't have time to debug all of the above. Sorry. > > I will chip in with bits and pieces here and there when I can, and > certainly I will be interested if it is shown conclusively to be an > issue in MPIR. But so far everything works fine for me between Pari > and MPIR on the machine in question. (I'm pretty sure you'll get the > same response if you report this as a bug to the gcc developers.) > > I hope Jason and you might be able to get somewhere with it though. > > Bill. > > 2009/11/15 William Stein <[email protected]>: > > On Sun, Nov 15, 2009 at 8:41 AM, Bill Hart <[email protected]> wrote: > >> 2009/11/15 Jason Moxham <[email protected]>: > >>> This issue has bought up a number of things that need to sorted. > >>> > >>> Sage shouldn't use LD_LIBRARY_PATH to get pari to recognise readline , > >>> but use ./Configure -with-readline etc , sage may have to use this > >>> method for other packages though? > >> > >> Agreed. Although I didn't know it was doing this incorrectly in the > >> first place. > > > > Just look at the spkg-install script in the pari spkg: > > > > ./Configure $PARI_EXTRA_OPTS --prefix=$SAGE_LOCAL > > --with-readline=$SAGE_LOCAL --with-gmp=$SAGE_LOCAL --kernel=gmp > > --graphic=none > > > > It's been doing the "right thing" all along. > > > >>> mpir-1.2 32bit fat should work with gcc , the non-fat versions work , > >>> and 64bit fat versions works , and apparently some 32bit fat versions > >>> also work , so its not version numbers or missing symbols. Perhaps > >>> debians gcc was built with a debian patched gmp which we have no > >>> "knowledge" of , although I would of thought that it should break in > >>> all cases not just with fat. > >> > >> Right, it probably should work, weird mallocs, nails or some other > >> funnys aside (though apparently Sage works just fine with gmp 4.3.1. > >> So the number of possibilities here is limited. > > > > apparently = definitely. > > > >> Also, if I could actually replicate the issue I could look into the > >> cause. As it is, I still haven't seen the issue occur. > >> > >> I've tried: > >> > >> 1) Building Pari against a fat binary mpir 1.3.0 on a 32 bit system > >> 2) Building Pari against a fat binary mpir 1.2.1 on debian32 > >> 3) Changing the compiler optimisation level to -O1 when building Pari > >> against a fat binary mpir-1.2.1 on debian32 > >> 4) Changed the LD_LIBRARY_PATH to /home/wbhart/mpir-1.2.1/.libs and > >> changing the compiler optimisation level to -O1 when building Pari > >> against a fat binary mpir-1.2.1 on debian32. > >> 5) Checking whether gcc or cpp are dynamically linked against GMP or > >> MPIR in the first place - they are not. > >> > >> So far I cannot reproduce the issue. > > > > You could replicate the exact issue by building Sage-4.2.1 with > > SAGE_FAT_BINARY="yes". Seeing it with your own eyes might be valuable: > > > > http://sage.math.washington.edu/home/wstein/farm/src/sage-4.2.1.tar > > > >> How does Pari know where to find libm? That is surely not built by > >> Sage. But presumably Pari would not build at all if it couldn't find > >> it. > >> > >> Another possibility is that some symbol we are leaking conflicts with > >> a libm symbol.... > >> > >> Dunno. > >> > >> Bill. > >> > >>> As far I can tell , the library versioning system does not allow for > >>> compatible librarys , so there is no solution to this . ie updating > >>> the soname numbers to reflect how mpir changes breaks the gmp soname > >>> numbers and the other way around as well. > >>> > >>> On Sunday 15 November 2009 15:45:19 Bill Hart wrote: > >>>> The version we use for MPIR 1.3.0 *is* 8.0.0. So that shouldn't even > >>>> work with gcc. It should require 7.x.y and since we have 8.0.0 that > >>>> means we don't implement the interface for 7.x.y. The linker should > >>>> complain. GMP 4.3.1 however would work, as it claims to implement the > >>>> previous interface. > >>>> > >>>> So at least this problem won't occur with the latest version of MPIR. > >>>> > >>>> Bill. > >>>> > >>>> 2009/11/15 Bill Hart <[email protected]>: > >>>> > Here are the library numbers for GMP 4.2.1 and 4.2.2: > >>>> > > >>>> > GMP libgmp libgmpxx libmp > >>>> > 4.2.1 7:1:4 4:1:1 4:10:1 > >>>> > 4.2.2 7:2:4 4:2:0 4:11:1 > >>>> > > >>>> > What this signifies is that there were no interface changes for > >>>> > libgmp, libgmpxx or libmp. > >>>> > > >>>> > For GMP 4.2.2 the age is back to 0. The age signifies the number of > >>>> > previous revisions of the interface this library supports. By > >>>> > changing it to 1, this signifies that libgmpxx supports intefaces 3 > >>>> > and 4 of libgmpxx. I think that was incorrect and fixed for GMP > >>>> > 4.2.2. > >>>> > > >>>> > Now debian gcc 4.3.2-2 ultimately requires gmp 4.2.2 (why not 4.2.1 > >>>> > I don't know - possibly because libmpfr had some changes which > >>>> > depended on bug fixes in gmp 4.2.2). Anyhow, for mpir 1.2.1 we set > >>>> > the numbers as: > >>>> > > >>>> > MPIR libgmp libgmpxx libmp > >>>> > 1.2.1 7:5:4 4:5:1 4:14:1 > >>>> > > >>>> > which basically signifies that the interface should be the same as > >>>> > for GMP 4.2.1 and 4.2.2. So in fact, it we say it should work with > >>>> > gcc. Also I'm unaware of any interface changes we made for MPIR > >>>> > 1.2.1 over GMP 4.2.1. except removal of the ternary operators in > >>>> > gmpxx.h. I do recall some corrections to return values of some > >>>> > functions, which were wrong. But I seem to recall that was a > >>>> > documentation issue only. > >>>> > > >>>> > Anyhow, one issue we have is that we did not set the age of libgmpxx > >>>> > back to 0, so we are still certifying we are compatible with > >>>> > interface 3 of libgmpxx, which is apparently not true. > >>>> > > >>>> > Now for MPIR 1.3.0 the numbers should be set to something like: > >>>> > > >>>> > MPIR libgmp libgmpxx libmp > >>>> > 1.3.0 8:0:0 4:6:1 4:16:1 > >>>> > > >>>> > I think it is ok that we removed the ternary operators from gmpxx.h > >>>> > because these are only found in gmpxx.h not in the binary itself. So > >>>> > that does not require a change of interface number (and it also > >>>> > follows GMP's lead on that issue). > >>>> > > >>>> > We've also removed old deprecated functions from libgmp. Thus the > >>>> > 8:0:0. There was actually an MPIR 1.2.2 which never got posted to > >>>> > the website, it had a libmp version of 4:15:1, hence the 4:16:2 for > >>>> > MPIR 1.3.0. > >>>> > > >>>> > Now subsequent GMP versions have had the following numbers: > >>>> > > >>>> > 4.2.3 7:3:4 4:3:0 4:12:1 > >>>> > 4.2.4 7:4:4 4:4:0 4:13:1 > >>>> > 4.3.0 8:0:5 5:0:1 4:14:1 > >>>> > 4.3.1 8:1:5 5:1:1 4:15:1 > >>>> > > >>>> > Note the interface change for libgmp to 8:0:5 for GMP 4.3.0. But no > >>>> > removed interfaces means they can bump the age to 5 instead of 0 as > >>>> > they are backwards compatible all the way back to GMP 3. > >>>> > > >>>> > Anyhow, if we change our version to 8:0:0 for MPIR 1.3.0, then > >>>> > basically we are saying we fully implement the GMP interface for GMP > >>>> > 4.3.0 but none of the previous interfaces, which is not true. > >>>> > > >>>> > Essentially there is nothing we can do to get this right. > >>>> > Essentially, if we want the version numbers to mean anything, we'll > >>>> > have to wait until GMP removes some interfaces and sets their age to > >>>> > 0 before removing any deprecated functions. Also, until we fully > >>>> > implement the additional interfaces in GMP 4.3.0 we should not > >>>> > update our interface number to 8. > >>>> > > >>>> > I'm unsure what the new interfaces are, but probably the extgcd > >>>> > functions operate differently, with different normalisation. There > >>>> > might also be some new documented functions. We should compare the > >>>> > manuals. I think there were some changes to some of the division > >>>> > functions. > >>>> > > >>>> > Bill. > >>>> > > >>>> > 2009/11/15 Bill Hart <[email protected]>: > >>>> >> This whole thread raises a question for MPIR 1.3.0. Are we still > >>>> >> binary interface compatible with GMP 4.2.1 given that we have > >>>> >> removed those deprecated functions? If not, then we ought to bump > >>>> >> our soname version numbers accordingly. But how to do this. If we > >>>> >> bump them, then we are essentially saying we are binary compatible > >>>> >> with the next version of GMP that changes the interface. That > >>>> >> wouldn't likely be correct. > >>>> >> > >>>> >> Bill. > >>>> >> > >>>> >> 2009/11/15 Bill Hart <[email protected]>: > >>>> >>> Actually it is the C preprocessor which depends on GMP, but again, > >>>> >>> it doesn't dynamically link with GMP on debian5-32 any more: > >>>> >>> > >>>> >>> wbh...@debian5-32:~$ldd /usr/bin/cpp > >>>> >>> linux-gate.so.1 => (0xb7fa5000) > >>>> >>> libc.so.6 => /lib/i686/cmov/libc.so.6 (0xb7e3b000) > >>>> >>> /lib/ld-linux.so.2 (0xb7fa6000) > >>>> >>> > >>>> >>> Bill. > >>>> >>> > >>>> >>> 2009/11/15 Bill Hart <[email protected]>: > >>>> >>>> OK, problem seems to have gone on debian5-32: > >>>> >>>> > >>>> >>>> ldd /usr/bin/gcc > >>>> >>>> linux-gate.so.1 => (0xb7f44000) > >>>> >>>> libc.so.6 => /lib/i686/cmov/libc.so.6 (0xb7dda000) > >>>> >>>> /lib/ld-linux.so.2 (0xb7f45000) > >>>> >>>> > >>>> >>>> So I can't try any of the above. Looks like someone just > >>>> >>>> statically linked gcc against GMP. And Pari now compiles just > >>>> >>>> fine with LD_LIBRARY_PATH set to the mpir/.libs directory. > >>>> >>>> > >>>> >>>> That will fix the problem with regard to building sage binaries > >>>> >>>> anyhow. > >>>> >>>> > >>>> >>>> Bill. > >>>> >>>> > >>>> >>>> 2009/11/15 Bill Hart <[email protected]>: > >>>> >>>>> A more robust solution is to create a little wrapper script for > >>>> >>>>> gcc which sets LD_LIBRARY_PATH to the system library path (the > >>>> >>>>> original LD_LIBRARY_PATH before the Sage environment was set). > >>>> >>>>> This is actually the accredited technique for complex situations > >>>> >>>>> (such as the one we have). > >>>> >>>>> > >>>> >>>>> http://www.linux.org/docs/ldp/howto/Program-Library-HOWTO/shared > >>>> >>>>>-libr aries.html > >>>> >>>>> > >>>> >>>>> Bill. > >>>> >>>>> > >>>> >>>>> 2009/11/15 Bill Hart <[email protected]>: > >>>> >>>>>> Although it doesn't fix the cython issue, one solution for Pari > >>>> >>>>>> would be to statically link against MPIR. However it isn't a > >>>> >>>>>> proper fix because there is every chance that a similar bug > >>>> >>>>>> could be hit building any of the Sage spkg's. Statically > >>>> >>>>>> linking MPIR against all of them would bloat the binary size, I > >>>> >>>>>> believe. > >>>> >>>>>> > >>>> >>>>>> Bill. > >>>> >>>>>> > >>>> >>>>>> 2009/11/15 Bill Hart <[email protected]>: > >>>> >>>>>>> I'm probably missing something important here, but why set > >>>> >>>>>>> LD_LIBRARY_PATH to the sage environment for either Configure > >>>> >>>>>>> or make, when building Pari? > >>>> >>>>>>> > >>>> >>>>>>> The correct way to tell Pari which readline and gmp to link > >>>> >>>>>>> against is --with-gmp=.... and --with-readline=..... > >>>> >>>>>>> > >>>> >>>>>>> LD_LIBRARY_PATH should only be changed at runtime. > >>>> >>>>>>> > >>>> >>>>>>> Of course make check probably both compiles the test suite and > >>>> >>>>>>> executes it, which requires LD_LIBRARY_PATH set two different > >>>> >>>>>>> ways at the same time. > >>>> >>>>>>> > >>>> >>>>>>> There is also a potential issue with Cython (I didn't check > >>>> >>>>>>> how Cython calls the compiler). It wants to run the C compiler > >>>> >>>>>>> at Sage runtime. That's also potentially messed up if someone > >>>> >>>>>>> writes some cython code which does constant folding. > >>>> >>>>>>> > >>>> >>>>>>> Really and truly, the gcc should not be dynamically linked > >>>> >>>>>>> against gmp, but statically linked. Under normal circumstances > >>>> >>>>>>> it is not a problem because the user simply adds the Sage > >>>> >>>>>>> local libs directory to LD_LIBRARY_PATH, leaving the system > >>>> >>>>>>> library path in there. Here we don't want to do that because > >>>> >>>>>>> we are providing our own version of "GMP". > >>>> >>>>>>> > >>>> >>>>>>> Basically there is no right way of dealing with an issue like > >>>> >>>>>>> this. If you fork a library that gcc uses then dynamically > >>>> >>>>>>> link gcc against that library, it's broken. > >>>> >>>>>>> > >>>> >>>>>>> Bill. > >>>> >>>>>>> > >>>> >>>>>>> 2009/11/15 Jason Moxham <[email protected]>: > >>>> >>>>>>>> On Sunday 15 November 2009 02:24:47 William Stein wrote: > >>>> >>>>>>>>> On Sat, Nov 14, 2009 at 6:17 PM, Jason Moxham > >>>> >>>>>>>>> <[email protected]> > >>>> >>>>>>>> > >>>> >>>>>>>> wrote: > >>>> >>>>>>>>> > Of course , that is the error > >>>> >>>>>>>>> > LD_LIBRARY_PATH sets the path for executables so there is > >>>> >>>>>>>>> > no need for it to be set when building pari (just when > >>>> >>>>>>>>> > running it) so the only thing that is USING libgmp is gcc > >>>> >>>>>>>>> > which doesn't like it . > >>>> >>>>>>>>> > >>>> >>>>>>>>> This means that a temporary workaround is that in the > >>>> >>>>>>>>> spkg-install script for PARI we put: > >>>> >>>>>>>>> > >>>> >>>>>>>>> echo "Building and install PARI" > >>>> >>>>>>>>> TMP=LD_LIBRARY_PATH; unset LD_LIBRARY_PATH > >>>> >>>>>>>>> if [ "$UNAME" = "CYGWIN" ]; then > >>>> >>>>>>>>> # There are weird bugs in PARI's build process on > >>>> >>>>>>>>> Windows XP # under Cygwin. > >>>> >>>>>>>>> # Passing in this extra flag gets around the bug. > >>>> >>>>>>>>> $MAKE GMPINCLUDE=-I$SAGE_LOCAL/include > >>>> >>>>>>>>> EXTRADLLDFLAGS=-lgmp gp else > >>>> >>>>>>>>> $MAKE gp > >>>> >>>>>>>>> fi > >>>> >>>>>>>>> LD_LIBRARY_PATH=$TMP > >>>> >>>>>>>> > >>>> >>>>>>>> I think pari wont use readline if we do this , but I dont > >>>> >>>>>>>> think sage uses pari like that ? so it should be OK > >>>> >>>>>>>> > >>>> >>>>>>>>> Of course, I'm curious why a FAT mpir crashes GCC... > >>>> >>>>>>>> > >>>> >>>>>>>> Yeah , weird , just seems to be debian 4.3.2 that does it , > >>>> >>>>>>>> NOTE: gcc-4.3.2 also buggers up some other packages eg > >>>> >>>>>>>> gmp-4.3.x , so it may not be worth the effort trying to fix > >>>> >>>>>>>> it. > >>>> >>>>>>>> > >>>> >>>>>>>>> I can't work on this now, unfortunately, since the latency > >>>> >>>>>>>>> of my net connection at this hotel is horrendous. > >>>> >>>>>>>>> > >>>> >>>>>>>>> William > >>>> >>>>>>>>> > >>>> >>>>>>>>> > On Sunday 15 November 2009 02:06:25 Jason Moxham wrote: > >>>> >>>>>>>>> >> this is with mpir-1.2 ,and I think we have only start to > >>>> >>>>>>>>> >> remove them in 1.3 > >>>> >>>>>>>>> >> > >>>> >>>>>>>>> >> I mean pari builds fine with our fat enabled mpir , but > >>>> >>>>>>>>> >> only if LD_LIBRARY_PATH does NOT point to our libmpir > >>>> >>>>>>>>> >> > >>>> >>>>>>>>> >> LD_LIBRARY_PATH is not used until linking time ? so it > >>>> >>>>>>>>> >> should have no effect on the compile . > >>>> >>>>>>>>> >> If gcc is using our libmpir internally , which it should > >>>> >>>>>>>>> >> not , then gcc may require libgmp to built with certain > >>>> >>>>>>>>> >> options , some sort of specific malloc etc > >>>> >>>>>>>>> >> > >>>> >>>>>>>>> >> On Sunday 15 November 2009 01:50:52 Bill Hart wrote: > >>>> >>>>>>>>> >> > Heh! I don't suppose gcc would be using old deprecated > >>>> >>>>>>>>> >> > functions which we've removed. :-) > >>>> >>>>>>>>> >> > > >>>> >>>>>>>>> >> > Bill. > >>>> >>>>>>>>> >> > > >>>> >>>>>>>>> >> > 2009/11/15 Bill Hart <[email protected]>: > >>>> >>>>>>>>> >> > > That seems like a likely possibility, in which case > >>>> >>>>>>>>> >> > > one presumes there is a symbol which GMP provides and > >>>> >>>>>>>>> >> > > we don't, or at least our interface is different. > >>>> >>>>>>>>> >> > > > >>>> >>>>>>>>> >> > > I think gcc only uses GMP for constant folding > >>>> >>>>>>>>> >> > > though, and the line in question didn't involve any > >>>> >>>>>>>>> >> > > constants did it? > >>>> >>>>>>>>> >> > > > >>>> >>>>>>>>> >> > > I wonder how one even debugs something like this. I > >>>> >>>>>>>>> >> > > suppose you could valgrind gcc while compiling that > >>>> >>>>>>>>> >> > > one file? > >>>> >>>>>>>>> >> > > > >>>> >>>>>>>>> >> > > Bill. > >>>> >>>>>>>>> >> > > > >>>> >>>>>>>>> >> > > 2009/11/15 Jason Moxham <[email protected]>: > >>>> >>>>>>>>> >> > >> export > >>>> >>>>>>>>> >> > >> LD_LIBRARY_PATH=/tmp/jason/sage-4.2.1/local/lib/R/li > >>>> >>>>>>>>> >> > >>b:/tm p/jason/sa ge- 4. > >>>> >>>>>>>>> >> > >> 2.1/local/lib/openmpi:/tmp/jason/sage-4.2.1/local/li > >>>> >>>>>>>>> >> > >>b/: > >>>> >>>>>>>>> >> > >> > >>>> >>>>>>>>> >> > >> like the sage shell does and then we get the same > >>>> >>>>>>>>> >> > >> error > >>>> >>>>>>>>> >> > >> > >>>> >>>>>>>>> >> > >> So I deleted all files in .../local/lib/ except > >>>> >>>>>>>>> >> > >> libgmp* and exported > >>>> >>>>>>>>> >> > >> LD_LIBRARY_PATH=/tmp/jason/sage-4.2.1/local/lib/: > >>>> >>>>>>>>> >> > >> > >>>> >>>>>>>>> >> > >> and we get the error > >>>> >>>>>>>>> >> > >> whereas without the export pari builds fine > >>>> >>>>>>>>> >> > >> > >>>> >>>>>>>>> >> > >> Could the gcc on debian32 be using the gmp in our > >>>> >>>>>>>>> >> > >> local path to do its internal optimizations , > >>>> >>>>>>>>> >> > >> whereas gcc should use the system gmp > >>>> >>>>>>>>> >> > >> > >>>> >>>>>>>>> >> > >> On Sunday 15 November 2009 00:24:25 Jason Moxham wrote: > >>>> >>>>>>>>> >> > >>> It appears to be the actual environment that sage > >>>> >>>>>>>>> >> > >>> provides in its "sage subshell" > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> ie > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> Building pari in the sage shell > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> sage subshell$ ./Configure --graphic=none > >>>> >>>>>>>>> >> > >>> --prefix=/tmp/jason/sage-4.2.1/local > >>>> >>>>>>>>> >> > >>> --with-readline=/tmp/jason/sage-4.2.1/local --with- > >>>> >>>>>>>>> >> > >>> gmp=/tmp/jason/sage-4.2.1/local --kernel=gmp > >>>> >>>>>>>>> >> > >>> --graphic=none && make gp Configuring pari-2.3.3 > >>>> >>>>>>>>> >> > >>> (STABLE) > >>>> >>>>>>>>> >> > >>> Checking echo to see how to suppress newlines... > >>>> >>>>>>>>> >> > >>> ...using -n. > >>>> >>>>>>>>> >> > >>> Looking for some tools first ... > >>>> >>>>>>>>> >> > >>> ...ld is /usr/bin/ld > >>>> >>>>>>>>> >> > >>> ...zcat is /bin/zcat > >>>> >>>>>>>>> >> > >>> ...gzip is /bin/gzip > >>>> >>>>>>>>> >> > >>> ...ranlib is /usr/bin/ranlib > >>>> >>>>>>>>> >> > >>> ...perl is /usr/bin/perl > >>>> >>>>>>>>> >> > >>> ...emacs is /usr/bin/emacs > >>>> >>>>>>>>> >> > >>> GNU compiler version 4.3.2 (Debian 4.3.2-1.1) > >>>> >>>>>>>>> >> > >>> Given the previous choices, sizeof(long) is 4 > >>>> >>>>>>>>> >> > >>> chars. The internal word representation of a double > >>>> >>>>>>>>> >> > >>> is l[1], l[0]. > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === Building for > >>>> >>>>>>>>> >> > >>> architecture: i686 running linux (ix86/GMP kernel) > >>>> >>>>>>>>> >> > >>> 32-bit version > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === C compiler is > >>>> >>>>>>>>> >> > >>> gcc -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> Executable linker is ld --export-dynamic Dynamic > >>>> >>>>>>>>> >> > >>> Lib linker is gcc -shared $(CFLAGS) $(DLCFLAGS) > >>>> >>>>>>>>> >> > >>> -Wl,-shared,- soname=$(LIBPARI_SONAME) Looking in C > >>>> >>>>>>>>> >> > >>> lib for some symbols... > >>>> >>>>>>>>> >> > >>> ...I did not find exp2. > >>>> >>>>>>>>> >> > >>> ...I did not find log2. > >>>> >>>>>>>>> >> > >>> ...Found strftime. > >>>> >>>>>>>>> >> > >>> ...Found getrusage. > >>>> >>>>>>>>> >> > >>> ...Found sigaction. > >>>> >>>>>>>>> >> > >>> ...Found TIOCGWINSZ. > >>>> >>>>>>>>> >> > >>> ...Found getrlimit. > >>>> >>>>>>>>> >> > >>> ...Found stat. > >>>> >>>>>>>>> >> > >>> ...Found vsnprintf. > >>>> >>>>>>>>> >> > >>> ...I did not find dlopen. > >>>> >>>>>>>>> >> > >>> Try again, with -ldl this time... > >>>> >>>>>>>>> >> > >>> ...Found dlopen. > >>>> >>>>>>>>> >> > >>> Checking for optional libraries and headers... > >>>> >>>>>>>>> >> > >>> ...Found libgmp in /tmp/jason/sage-4.2.1/local/lib > >>>> >>>>>>>>> >> > >>> ...Found gmp header in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/include Using GNU MP, > >>>> >>>>>>>>> >> > >>> version 4.2.1 > >>>> >>>>>>>>> >> > >>> ### > >>>> >>>>>>>>> >> > >>> ### libX11.so not found. Please install X11 > >>>> >>>>>>>>> >> > >>> development files. ### They usually come in > >>>> >>>>>>>>> >> > >>> XFree86-devel (RPM) or xlibs-dev (Debian) packages > >>>> >>>>>>>>> >> > >>> ### > >>>> >>>>>>>>> >> > >>> ### X11 not found > >>>> >>>>>>>>> >> > >>> ### FLTK not found. Building without FLTK support > >>>> >>>>>>>>> >> > >>> Hi-Res Graphics: none > >>>> >>>>>>>>> >> > >>> ...Found libreadline in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/lib ...Found readline > >>>> >>>>>>>>> >> > >>> header in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/include/readline > >>>> >>>>>>>>> >> > >>> ...Found history header in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/include/readline ### > >>>> >>>>>>>>> >> > >>> ### libncurses.so not found. Please install ncurses > >>>> >>>>>>>>> >> > >>> development files. ### They usually come in > >>>> >>>>>>>>> >> > >>> ncurses-devel (RPM) or libncurses-dev (Debian) > >>>> >>>>>>>>> >> > >>> packages ### > >>>> >>>>>>>>> >> > >>> ...Found libtermcap in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/lib/ ...Library termcap > >>>> >>>>>>>>> >> > >>> needed by readline > >>>> >>>>>>>>> >> > >>> Using GNU readline, version 6.0 > >>>> >>>>>>>>> >> > >>> Installation prefix ? [/tmp/jason/sage-4.2.1/local] > >>>> >>>>>>>>> >> > >>> ...for architecture-independent files > >>>> >>>>>>>>> >> > >>> (share-prefix) ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share] > >>>> >>>>>>>>> >> > >>> Installation directories for: > >>>> >>>>>>>>> >> > >>> ...executables (gp, gphelp) ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/bin] ...libraries > >>>> >>>>>>>>> >> > >>> (libpari) ? [/tmp/jason/sage-4.2.1/local/lib] > >>>> >>>>>>>>> >> > >>> ...include files ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/include] ...manual > >>>> >>>>>>>>> >> > >>> pages ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share/man/man1] > >>>> >>>>>>>>> >> > >>> ...emacs macros ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share/emacs/site-lisp/ > >>>> >>>>>>>>> >> > >>>pari] ...other system-dependant data ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/lib/pari] ...other > >>>> >>>>>>>>> >> > >>> system-independant data ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share/pari] Default is > >>>> >>>>>>>>> >> > >>> dynamic executable and shared library > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === Extracting > >>>> >>>>>>>>> >> > >>> examples/Makefile.linux-i686 Extracting > >>>> >>>>>>>>> >> > >>> Olinux-i686/Makefile > >>>> >>>>>>>>> >> > >>> Extracting Olinux-i686/../Odos/paricfg.h > >>>> >>>>>>>>> >> > >>> ./config/paricfgDOS.h.SH: line 3: > >>>> >>>>>>>>> >> > >>> Olinux-i686/../Odos/paricfg.h: No such file or > >>>> >>>>>>>>> >> > >>> directory Extracting Olinux-i686/paricfg.h > >>>> >>>>>>>>> >> > >>> Extracting Makefile > >>>> >>>>>>>>> >> > >>> Extracting scripts and macros > >>>> >>>>>>>>> >> > >>> ...in doc > >>>> >>>>>>>>> >> > >>> ...in emacs > >>>> >>>>>>>>> >> > >>> ...in misc > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === Shall we try to build > >>>> >>>>>>>>> >> > >>> pari 2.3.3 (released) now (y/n)? [n] Ok. Type "make > >>>> >>>>>>>>> >> > >>> install" when you are ready > >>>> >>>>>>>>> >> > >>> Bye ! > >>>> >>>>>>>>> >> > >>> Making gp in Olinux-i686 > >>>> >>>>>>>>> >> > >>> make[1]: Entering directory > >>>> >>>>>>>>> >> > >>> `/tmp/jason/sage-4.2.1/spkg/build/pari-2.3.3.p5/src > >>>> >>>>>>>>> >> > >>>/Olin ux-i686' File ../src/funclist not changed. > >>>> >>>>>>>>> >> > >>> gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers > >>>> >>>>>>>>> >> > >>> -I../src/language > >>>> >>>>>>>>> >> > >>> -I/tmp/jason/sage-4.2.1/local/include -o gp.o > >>>> >>>>>>>>> >> > >>> ../src/gp/gp.c gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -I../src/language > >>>> >>>>>>>>> >> > >>> -I/tmp/jason/sage-4.2.1/local/include -o gp_rl.o > >>>> >>>>>>>>> >> > >>> ../src/gp/gp_rl.c gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -I../src/graph -o plotport.o > >>>> >>>>>>>>> >> > >>> ../src/graph/plotport.c ../src/graph/plotport.c: In > >>>> >>>>>>>>> >> > >>> function ârectticksâ: > >>>> >>>>>>>>> >> > >>> ../src/graph/plotport.c:469: internal compiler > >>>> >>>>>>>>> >> > >>> error: Segmentation fault Please submit a full bug > >>>> >>>>>>>>> >> > >>> report, with preprocessed source if appropriate. > >>>> >>>>>>>>> >> > >>> See <file:///usr/share/doc/gcc-4.3/README.Bugs> for > >>>> >>>>>>>>> >> > >>> instructions. make[1]: *** [plotport.o] Error 1 > >>>> >>>>>>>>> >> > >>> make[1]: Leaving directory > >>>> >>>>>>>>> >> > >>> `/tmp/jason/sage-4.2.1/spkg/build/pari-2.3.3.p5/src > >>>> >>>>>>>>> >> > >>>/Olin ux-i686' make: *** [gp] Error 2 > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1 > >>>> >>>>>>>>> >> > >>> sage subshell$ > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> And build it in a normal shell > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> jasonmox...@debian5-32:/tmp/jason/sage-4.2.1/spkg/b > >>>> >>>>>>>>> >> > >>>uild/ pari-2.3.3 .p5 /s rc$ ./Configure > >>>> >>>>>>>>> >> > >>> --graphic=none > >>>> >>>>>>>>> >> > >>> --prefix=/tmp/jason/sage-4.2.1/local --with- > >>>> >>>>>>>>> >> > >>> readline=/tmp/jason/sage-4.2.1/local > >>>> >>>>>>>>> >> > >>> --with-gmp=/tmp/jason/sage-4.2.1/local -- > >>>> >>>>>>>>> >> > >>> kernel=gmp --graphic=none && make gp > >>>> >>>>>>>>> >> > >>> Configuring pari-2.3.3 (STABLE) > >>>> >>>>>>>>> >> > >>> Checking echo to see how to suppress newlines... > >>>> >>>>>>>>> >> > >>> ...using -n. > >>>> >>>>>>>>> >> > >>> Looking for some tools first ... > >>>> >>>>>>>>> >> > >>> ...ld is /usr/bin/ld > >>>> >>>>>>>>> >> > >>> ...zcat is /bin/zcat > >>>> >>>>>>>>> >> > >>> ...gzip is /bin/gzip > >>>> >>>>>>>>> >> > >>> ...ranlib is /usr/bin/ranlib > >>>> >>>>>>>>> >> > >>> ...perl is /usr/bin/perl > >>>> >>>>>>>>> >> > >>> ...emacs is /usr/bin/emacs > >>>> >>>>>>>>> >> > >>> Looking for the compilers ... > >>>> >>>>>>>>> >> > >>> ...cc is /usr/bin/cc > >>>> >>>>>>>>> >> > >>> ...gcc is /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> GNU compiler version 4.3.2 (Debian 4.3.2-1.1) > >>>> >>>>>>>>> >> > >>> Given the previous choices, sizeof(long) is 4 > >>>> >>>>>>>>> >> > >>> chars. The internal word representation of a double > >>>> >>>>>>>>> >> > >>> is l[1], l[0]. > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === Building for > >>>> >>>>>>>>> >> > >>> architecture: i686 running linux (ix86/GMP kernel) > >>>> >>>>>>>>> >> > >>> 32-bit version > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === C compiler is > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit- frame-pointer Executable linker is > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit- frame-pointer -Wl,--export-dynamic Dynamic > >>>> >>>>>>>>> >> > >>> Lib linker is /usr/bin/gcc -shared $(CFLAGS) > >>>> >>>>>>>>> >> > >>> $(DLCFLAGS) -Wl,- shared,-soname=$(LIBPARI_SONAME) > >>>> >>>>>>>>> >> > >>> Looking in C lib for some symbols... > >>>> >>>>>>>>> >> > >>> ...I did not find exp2. > >>>> >>>>>>>>> >> > >>> ...I did not find log2. > >>>> >>>>>>>>> >> > >>> ...Found strftime. > >>>> >>>>>>>>> >> > >>> ...Found getrusage. > >>>> >>>>>>>>> >> > >>> ...Found sigaction. > >>>> >>>>>>>>> >> > >>> ...Found TIOCGWINSZ. > >>>> >>>>>>>>> >> > >>> ...Found getrlimit. > >>>> >>>>>>>>> >> > >>> ...Found stat. > >>>> >>>>>>>>> >> > >>> ...Found vsnprintf. > >>>> >>>>>>>>> >> > >>> ...I did not find dlopen. > >>>> >>>>>>>>> >> > >>> Try again, with -ldl this time... > >>>> >>>>>>>>> >> > >>> ...Found dlopen. > >>>> >>>>>>>>> >> > >>> Checking for optional libraries and headers... > >>>> >>>>>>>>> >> > >>> ...Found libgmp in /tmp/jason/sage-4.2.1/local/lib > >>>> >>>>>>>>> >> > >>> ...Found gmp header in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/include Using GNU MP, > >>>> >>>>>>>>> >> > >>> version 4.2.1 > >>>> >>>>>>>>> >> > >>> ### > >>>> >>>>>>>>> >> > >>> ### libX11.so not found. Please install X11 > >>>> >>>>>>>>> >> > >>> development files. ### They usually come in > >>>> >>>>>>>>> >> > >>> XFree86-devel (RPM) or xlibs-dev (Debian) packages > >>>> >>>>>>>>> >> > >>> ### > >>>> >>>>>>>>> >> > >>> ### X11 not found > >>>> >>>>>>>>> >> > >>> ### FLTK not found. Building without FLTK support > >>>> >>>>>>>>> >> > >>> Hi-Res Graphics: none > >>>> >>>>>>>>> >> > >>> ...Found libreadline in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/lib ...Found readline > >>>> >>>>>>>>> >> > >>> header in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/include/readline > >>>> >>>>>>>>> >> > >>> ...Found history header in > >>>> >>>>>>>>> >> > >>> /tmp/jason/sage-4.2.1/local/include/readline ### > >>>> >>>>>>>>> >> > >>> ### libncurses.so not found. Please install ncurses > >>>> >>>>>>>>> >> > >>> development files. ### They usually come in > >>>> >>>>>>>>> >> > >>> ncurses-devel (RPM) or libncurses-dev (Debian) > >>>> >>>>>>>>> >> > >>> packages ### > >>>> >>>>>>>>> >> > >>> ### > >>>> >>>>>>>>> >> > >>> ### Readline library detected, but does not seem to > >>>> >>>>>>>>> >> > >>> work ### > >>>> >>>>>>>>> >> > >>> ### Building without GNU readline support > >>>> >>>>>>>>> >> > >>> Installation prefix ? [/tmp/jason/sage-4.2.1/local] > >>>> >>>>>>>>> >> > >>> ...for architecture-independent files > >>>> >>>>>>>>> >> > >>> (share-prefix) ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share] > >>>> >>>>>>>>> >> > >>> Installation directories for: > >>>> >>>>>>>>> >> > >>> ...executables (gp, gphelp) ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/bin] ...libraries > >>>> >>>>>>>>> >> > >>> (libpari) ? [/tmp/jason/sage-4.2.1/local/lib] > >>>> >>>>>>>>> >> > >>> ...include files ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/include] ...manual > >>>> >>>>>>>>> >> > >>> pages ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share/man/man1] > >>>> >>>>>>>>> >> > >>> ...emacs macros ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share/emacs/site-lisp/ > >>>> >>>>>>>>> >> > >>>pari] ...other system-dependant data ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/lib/pari] ...other > >>>> >>>>>>>>> >> > >>> system-independant data ? > >>>> >>>>>>>>> >> > >>> [/tmp/jason/sage-4.2.1/local/share/pari] Default is > >>>> >>>>>>>>> >> > >>> dynamic executable and shared library > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === Extracting > >>>> >>>>>>>>> >> > >>> examples/Makefile.linux-i686 Extracting > >>>> >>>>>>>>> >> > >>> Olinux-i686/Makefile > >>>> >>>>>>>>> >> > >>> Extracting Olinux-i686/../Odos/paricfg.h > >>>> >>>>>>>>> >> > >>> ./config/paricfgDOS.h.SH: line 3: > >>>> >>>>>>>>> >> > >>> Olinux-i686/../Odos/paricfg.h: No such file or > >>>> >>>>>>>>> >> > >>> directory Extracting Olinux-i686/paricfg.h > >>>> >>>>>>>>> >> > >>> Extracting Makefile > >>>> >>>>>>>>> >> > >>> Extracting scripts and macros > >>>> >>>>>>>>> >> > >>> ...in doc > >>>> >>>>>>>>> >> > >>> ...in emacs > >>>> >>>>>>>>> >> > >>> ...in misc > >>>> >>>>>>>>> >> > >>> =================================================== > >>>> >>>>>>>>> >> > >>>===== ========== === == === Shall we try to build > >>>> >>>>>>>>> >> > >>> pari 2.3.3 (released) now (y/n)? [n] Ok. Type "make > >>>> >>>>>>>>> >> > >>> install" when you are ready > >>>> >>>>>>>>> >> > >>> Bye ! > >>>> >>>>>>>>> >> > >>> Making gp in Olinux-i686 > >>>> >>>>>>>>> >> > >>> make[1]: Entering directory > >>>> >>>>>>>>> >> > >>> `/tmp/jason/sage-4.2.1/spkg/build/pari-2.3.3.p5/src > >>>> >>>>>>>>> >> > >>>/Olin ux-i686' File ../src/funclist not changed. > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers > >>>> >>>>>>>>> >> > >>> -I../src/language -o gp.o ../src/gp/gp.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -I../src/language -o gp_rl.o > >>>> >>>>>>>>> >> > >>> ../src/gp/gp_rl.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -I../src/graph -o plotport.o > >>>> >>>>>>>>> >> > >>> ../src/graph/plotport.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o plotnull.o > >>>> >>>>>>>>> >> > >>> ../src/graph/plotnull.c cat ../src/kernel/gmp/mp.c > >>>> >>>>>>>>> >> > >>> ../src/kernel/none/cmp.c ../src/kernel/none/gcdll.c > >>>> >>>>>>>>> >> > >>> ../src/kernel/none/ratlift.c > >>>> >>>>>>>>> >> > >>> ../src/kernel/none/invmod.c > >>>> >>>>>>>>> >> > >>> ../src/kernel/gmp/gcd.c > >>>> >>>>>>>>> >> > >>> ../src/kernel/none/mp_indep.c > >>>> >>>>>>>>> >> > >>> ../src/kernel/none/add.c > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > mp.c > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers > >>>> >>>>>>>>> >> > >>> -I/tmp/jason/sage-4.2.1/local/include -o mp.o mp.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> mpinl.o ../src/kernel/none/mpinl.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> alglin1.o ../src/basemath/alglin1.c /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> alglin2.o ../src/basemath/alglin2.c /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> arith1.o ../src/basemath/arith1.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o arith2.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/arith2.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o base1.o ../src/basemath/base1.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> base2.o ../src/basemath/base2.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o base3.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/base3.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o base4.o ../src/basemath/base4.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> base5.o ../src/basemath/base5.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o bibli1.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/bibli1.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o bibli2.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/bibli2.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o buch1.o ../src/basemath/buch1.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> buch2.o ../src/basemath/buch2.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o buch3.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/buch3.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o buch4.o ../src/basemath/buch4.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o Flx.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/Flx.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o galconj.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/galconj.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o gen1.o ../src/basemath/gen1.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> gen2.o ../src/basemath/gen2.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> gen3.o ../src/basemath/gen3.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> ifactor1.o ../src/basemath/ifactor1.c /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> perm.o ../src/basemath/perm.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o polarit1.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/polarit1.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o polarit2.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/polarit2.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o polarit3.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/polarit3.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o Qfb.o ../src/basemath/Qfb.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> RgX.o ../src/basemath/RgX.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> rootpol.o ../src/basemath/rootpol.c /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> subcyclo.o ../src/basemath/subcyclo.c /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> subgroup.o ../src/basemath/subgroup.c /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> trans1.o ../src/basemath/trans1.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o trans2.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/trans2.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o trans3.o > >>>> >>>>>>>>> >> > >>> ../src/basemath/trans3.c cd ../src/desc && > >>>> >>>>>>>>> >> > >>> /usr/bin/perl gen_member pari.desc > members-linux- > >>>> >>>>>>>>> >> > >>> i686-15930.tmp mv > >>>> >>>>>>>>> >> > >>> ../src/desc/members-linux-i686-15930.tmp > >>>> >>>>>>>>> >> > >>> ../src/language/members.h /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o anal.o ../src/language/anal.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> compat.o ../src/language/compat.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o default.o > >>>> >>>>>>>>> >> > >>> ../src/language/default.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o errmsg.o > >>>> >>>>>>>>> >> > >>> ../src/language/errmsg.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o es.o ../src/language/es.c cd > >>>> >>>>>>>>> >> > >>> ../src/desc && /usr/bin/perl gen_proto basic > >>>> >>>>>>>>> >> > >>> pari.desc > init-linux- i686-15930.tmp > >>>> >>>>>>>>> >> > >>> mv ../src/desc/init-linux-i686-15930.tmp > >>>> >>>>>>>>> >> > >>> ../src/language/init.h /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o init.o ../src/language/init.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> intnum.o ../src/language/intnum.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o members.o > >>>> >>>>>>>>> >> > >>> ../src/language/members.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o sumiter.o > >>>> >>>>>>>>> >> > >>> ../src/language/sumiter.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o aprcl.o ../src/modules/aprcl.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> elldata.o ../src/modules/elldata.c /usr/bin/gcc -c > >>>> >>>>>>>>> >> > >>> -O1 -Wall -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -I. - I../src/headers -o elliptic.o > >>>> >>>>>>>>> >> > >>> ../src/modules/elliptic.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o galois.o > >>>> >>>>>>>>> >> > >>> ../src/modules/galois.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o groupid.o > >>>> >>>>>>>>> >> > >>> ../src/modules/groupid.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o kummer.o > >>>> >>>>>>>>> >> > >>> ../src/modules/kummer.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o mpqs.o ../src/modules/mpqs.c > >>>> >>>>>>>>> >> > >>> /usr/bin/gcc -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> nffactor.o ../src/modules/nffactor.c /usr/bin/gcc > >>>> >>>>>>>>> >> > >>> -c -O1 -Wall -fno-strict-aliasing > >>>> >>>>>>>>> >> > >>> -fomit-frame-pointer -I. - I../src/headers -o > >>>> >>>>>>>>> >> > >>> part.o ../src/modules/part.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o stark.o > >>>> >>>>>>>>> >> > >>> ../src/modules/stark.c /usr/bin/gcc -c -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer -I. - > >>>> >>>>>>>>> >> > >>> I../src/headers -o subfield.o > >>>> >>>>>>>>> >> > >>> ../src/modules/subfield.c /usr/bin/gcc -c -O1 > >>>> >>>>>>>>> >> > >>> -Wall -fno-strict-aliasing -fomit-frame-pointer -I. > >>>> >>>>>>>>> >> > >>> - I../src/headers -o thue.o ../src/modules/thue.c > >>>> >>>>>>>>> >> > >>> rm -f libpari-gmp.so.2.3.3 /usr/bin/gcc -o > >>>> >>>>>>>>> >> > >>> libpari-gmp.so.2.3.3 -shared -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -Wl,-shared,-soname=libpari-gmp.so.2 mp.o mpinl.o > >>>> >>>>>>>>> >> > >>> alglin1.o alglin2.o arith1.o arith2.o base1.o > >>>> >>>>>>>>> >> > >>> base2.o base3.o base4.o base5.o bibli1.o bibli2.o > >>>> >>>>>>>>> >> > >>> buch1.o buch2.o buch3.o buch4.o Flx.o galconj.o > >>>> >>>>>>>>> >> > >>> gen1.o gen2.o gen3.o ifactor1.o perm.o polarit1.o > >>>> >>>>>>>>> >> > >>> polarit2.o polarit3.o Qfb.o RgX.o rootpol.o > >>>> >>>>>>>>> >> > >>> subcyclo.o subgroup.o trans1.o trans2.o trans3.o > >>>> >>>>>>>>> >> > >>> anal.o compat.o default.o errmsg.o es.o init.o > >>>> >>>>>>>>> >> > >>> intnum.o members.o sumiter.o aprcl.o elldata.o > >>>> >>>>>>>>> >> > >>> elliptic.o galois.o groupid.o kummer.o mpqs.o > >>>> >>>>>>>>> >> > >>> nffactor.o part.o stark.o subfield.o thue.o -lc > >>>> >>>>>>>>> >> > >>> -ldl -lm > >>>> >>>>>>>>> >> > >>> -L/tmp/jason/sage-4.2.1/local/lib -lgmp if test > >>>> >>>>>>>>> >> > >>> "libpari-gmp.so.2.3.3" != "libpari.so"; then > >>>> >>>>>>>>> >> > >>> rm -f libpari.so; ln -s libpari-gmp.so.2.3.3 > >>>> >>>>>>>>> >> > >>> libpari.so; fi if test "libpari-gmp.so.2.3.3" != > >>>> >>>>>>>>> >> > >>> "libpari-gmp.so.2"; then rm -f libpari-gmp.so.2; > >>>> >>>>>>>>> >> > >>> ln -s libpari-gmp.so.2.3.3 libpari-gmp.so.2; > >>>> >>>>>>>>> >> > >>> fi rm -f gp-dyn /usr/bin/gcc -o gp-dyn -O1 -Wall > >>>> >>>>>>>>> >> > >>> -fno-strict-aliasing -fomit-frame-pointer > >>>> >>>>>>>>> >> > >>> -Wl,--export-dynamic gp.o gp_init.o gp_rl.o > >>>> >>>>>>>>> >> > >>> highlvl.o whatnow.o plotport.o plotnull.o > >>>> >>>>>>>>> >> > >>> -L"/tmp/jason/sage-4.2.1/spkg/build/pari-2.3.3.p5/s > >>>> >>>>>>>>> >> > >>>rc/Ol inux-i686" -L/tmp/jason/sage-4.2.1/local/lib > >>>> >>>>>>>>> >> > >>> -lpari -ldl -lm - L/tmp/jason/sage-4.2.1/local/lib > >>>> >>>>>>>>> >> > >>> -lgmp rm -f ../gp > >>>> >>>>>>>>> >> > >>> ln -s Olinux-i686/gp-dyn ../gp > >>>> >>>>>>>>> >> > >>> make[1]: Leaving directory > >>>> >>>>>>>>> >> > >>> `/tmp/jason/sage-4.2.1/spkg/build/pari-2.3.3.p5/src > >>>> >>>>>>>>> >> > >>>/Olin ux-i686' > >>>> >>>>>>>>> >> > >>> jasonmox...@debian5-32:/tmp/jason/sage-4.2.1/spkg/b > >>>> >>>>>>>>> >> > >>>uild/ pari-2.3.3 .p5 /s rc$ > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> If the line number where the error occurs is > >>>> >>>>>>>>> >> > >>> correct then it looks like libm is at fault > >>>> >>>>>>>>> >> > >>> > >>>> >>>>>>>>> >> > >>> On Saturday 14 November 2009 19:23:19 Bill Hart wrote: > >>>> >>>>>>>>> >> > >>> > Was the option -O1 passed to gcc in all instances > >>>> >>>>>>>>> >> > >>> > where the problem occurred? > >>>> >>>>>>>>> >> > >>> > > >>>> >>>>>>>>> >> > >>> > I have heard of instances where -O1 will cause > >>>> >>>>>>>>> >> > >>> > macro errors which cause the compiler to shut > >>>> >>>>>>>>> >> > >>> > down. When a higher optimisation level is used > >>>> >>>>>>>>> >> > >>> > the macro which causes the crash in gcc is > >>>> >>>>>>>>> >> > >>> > optimised away. > >>>> >>>>>>>>> >> > >>> > > >>>> >>>>>>>>> >> > >>> > If that turns out to be the issue, the solution > >>>> >>>>>>>>> >> > >>> > will be to simply compile that one file with -O2 > >>>> >>>>>>>>> >> > >>> > optimisation. For most things -O1 is far too slow > >>>> >>>>>>>>> >> > >>> > anyway. > >>>> >>>>>>>>> >> > >>> > > >>>> >>>>>>>>> >> > >>> > Bill. > >>>> >>>>>>>>> >> > >>> > > >>>> >>>>>>>>> >> > >>> > 2009/11/14 William Stein <[email protected]>: > >>>> >>>>>>>>> >> > >>> > > On Sat, Nov 14, 2009 at 12:05 AM, Jason Moxham > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > <[email protected]> wrote: > >>>> >>>>>>>>> >> > >>> > >> Hi > >>>> >>>>>>>>> >> > >>> > >> > >>>> >>>>>>>>> >> > >>> > >> I thought I would give it a try , but I cant > >>>> >>>>>>>>> >> > >>> > >> login to debian32 , doesn't like my password , > >>>> >>>>>>>>> >> > >>> > >> although boxen and fedora32 are OK ?? I > >>>> >>>>>>>>> >> > >>> > >> thought the passwords were all the same for > >>>> >>>>>>>>> >> > >>> > >> the virtual machines. > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > No. I've added your login info so you should > >>>> >>>>>>>>> >> > >>> > > be able to login now. > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > >> I havent managed to reproduce any error on > >>>> >>>>>>>>> >> > >>> > >> some other 32bit machines but nothing was > >>>> >>>>>>>>> >> > >>> > >> exactly the same. > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > You might want to try starting by doing > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > export SAGE_FAT_BINARY="yes" > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > then build sage-4.2.1.tar by typing "make", > >>>> >>>>>>>>> >> > >>> > > which is at > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > http://sage.math.washington.edu/home/wstein/far > >>>> >>>>>>>>> >> > >>> > >m/src / > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > It'll take a few hours, but you should get the > >>>> >>>>>>>>> >> > >>> > > error. > >>>> >>>>>>>>> >> > >>> > > > >>>> >>>>>>>>> >> > >>> > > William > > > > -- > > William Stein > > Associate Professor of Mathematics > > University of Washington > > http://wstein.org > > --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "mpir-devel" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/mpir-devel?hl=en -~----------~----~----~----~------~----~------~--~---
