This exception looks strange. For a start, can you try to update your Java installation? I believe the version 1.6.0_02-b06 is quite old. Latest version for Windows is 1.6.0_25 - http://download.oracle.com/otn-pub/java/jdk/6u25-b06/jdk-6u25-windows-i586.exe
Tomas On May 19, 2011, at 10:05 PM, Chiarina Darrah wrote: > I'm using mzmine 2.2 now :-) > > My java is > C:\>java -version > java version "1.6.0_02" > Java(TM) SE Runtime Environment (build 1.6.0_02-b06) > Java HotSpot(TM) Client VM (build 1.6.0_02-b06, mixed mode) > > My computer is > C:\>systeminfo (edited!) > OS Name: Microsoft Windows XP Professional > OS Version: 5.1.2600 Service Pack 2 Build 2600 > System type: X86-based PC > Processor(s): 2 Processor(s) Installed. > [01]: x86 Family 6 Model 15 Stepping 11 > GenuineIntel > ~2327 Mhz > [02]: x86 Family 6 Model 15 Stepping 11 > GenuineIntel > ~2327 Mhz > BIOS Version: DELL - 15 > Total Physical Memory: 2,005 MB > Available Physical Memory: 637 MB > Virtual Memory: Max Size: 2,048 MB > Virtual Memory: Available: 2,008 MB > Virtual Memory: In Use: 40 MB > Hotfix(s): 384 Hotfix(s) Installed. > > And here is my exception report! > Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at javax.swing.JRootPane.addNotify(JRootPane.java:735) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addImpl(Container.java:1062) > at javax.swing.JLayeredPane.addImpl(JLayeredPane.java:209) > at javax.swing.JDesktopPane.addImpl(JDesktopPane.java:470) > at java.awt.Container.add(Container.java:903) > at > net.sf.mzmine.desktop.impl.MainPanel.addInternalFrame(MainPanel.java: > 110) > at > net.sf.mzmine.desktop.impl.MainWindow.addInternalFrame(MainWindow.jav > a:73) > at > net.sf.mzmine.modules.visualization.peaksummary.PeakSummaryVisualizer > .showNewPeakSummaryWindow(PeakSummaryVisualizer.java:75) > at > net.sf.mzmine.modules.visualization.peaklist.PeakListTablePopupMenu.a > ctionPerformed(PeakListTablePopupMenu.java:464) > at > javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:19 > 95) > at > javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.jav > a:2318) > at > javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel > .java:387) > at > javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242 > ) > at javax.swing.AbstractButton.doClick(AbstractButton.java:357) > at > javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1 > 216) > at > javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMen > uItemUI.java:1257) > at java.awt.Component.processMouseEvent(Component.java:6038) > at javax.swing.JComponent.processMouseEvent(JComponent.java:3265) > at java.awt.Component.processEvent(Component.java:5803) > at java.awt.Container.processEvent(Container.java:2058) > at java.awt.Component.dispatchEventImpl(Component.java:4410) > at java.awt.Container.dispatchEventImpl(Container.java:2116) > at java.awt.Component.dispatchEvent(Component.java:4240) > at > java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4322 > ) > at > java.awt.LightweightDispatcher.processMouseEvent(Container.java:3986) > > at > java.awt.LightweightDispatcher.dispatchEvent(Container.java:3916) > at java.awt.Container.dispatchEventImpl(Container.java:2102) > at java.awt.Window.dispatchEventImpl(Window.java:2429) > at java.awt.Component.dispatchEvent(Component.java:4240) > at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) > at > java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThre > ad.java:273) > at > java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread. > java:183) > at > java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThre > ad.java:173) > at > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168) > > at > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160) > > at java.awt.EventDispatchThread.run(EventDispatchThread.java:121) > Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at java.awt.Container.addNotify(Container.java:2592) > at javax.swing.JComponent.addNotify(JComponent.java:4683) > at javax.swing.JRootPane.addNotify(JRootPane.java:735) > at java.awt.Container.addNotify(Container.java:2592) > at java.awt.Window.addNotify(Window.java:635) > at java.awt.Window.pack(Window.java:663) > at > net.sf.mzmine.util.components.ComponentToolTipManager.showTipWindow(C > omponentToolTipManager.java:130) > at > net.sf.mzmine.util.components.ComponentToolTipManager.initiateToolTip > (ComponentToolTipManager.java:229) > at > net.sf.mzmine.util.components.ComponentToolTipManager.mouseEntered(Co > mponentToolTipManager.java:195) > at > java.awt.AWTEventMulticaster.mouseEntered(AWTEventMulticaster.java:28 > 3) > at java.awt.Component.processMouseEvent(Component.java:6047) > at javax.swing.JComponent.processMouseEvent(JComponent.java:3265) > at java.awt.Component.processEvent(Component.java:5803) > at java.awt.Container.processEvent(Container.java:2058) > at java.awt.Component.dispatchEventImpl(Component.java:4410) > at java.awt.Container.dispatchEventImpl(Container.java:2116) > at java.awt.Component.dispatchEvent(Component.java:4240) > at > java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4322 > ) > at > java.awt.LightweightDispatcher.trackMouseEnterExit(Container.java:411 > 1) > at > java.awt.LightweightDispatcher.processMouseEvent(Container.java:3968) > > at > java.awt.LightweightDispatcher.dispatchEvent(Container.java:3916) > at java.awt.Container.dispatchEventImpl(Container.java:2102) > at java.awt.Window.dispatchEventImpl(Window.java:2429) > at java.awt.Component.dispatchEvent(Component.java:4240) > at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) > at > java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThre > ad.java:273) > at > java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread. > java:183) > at > java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThre > ad.java:173) > at > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:168) > > at > java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:160) > > at java.awt.EventDispatchThread.run(EventDispatchThread.java:121) > > Thanks! > Chiarina > > > > > > > > On 19/05/2011 06:30, Tomas Pluskal wrote: >> It works for me in MZmine 2.2 >> What platform are you using and what version of Java (try running 'java >> -version')? >> Do you see any exception reports in the MZmine console? >> >> Tomas >> >> On May 18, 2011, at 11:47 PM, Chiarina Darrah wrote: >> >>> Hi! I was wondering what happened to the peak row summary? When I click >>> on a peak row>show>peak row summary nothing happens. In addition, when I >>> mouse over the peak shape cell in the peaklist I don't get a little >>> floating window with a list saying all the samples my peak appeared in, >>> as there used to be. Is this a known issue? >>> I know I can scroll across the entire peaklist but with 280 samples, >>> it's very nice to have this little pop up list. Also because "row number >>> of detected peaks" does not appear as a column until you export the >>> peaklist, and the peak row summary/floating window give me an idea of >>> this within mzmine. >>> Many thanks, Chiarina. >>> >>> -- >>> ================================================================== >>> Chiarina Darrah >>> >>> Tel:+32 (0)9 331 38 85 fax:+32 (0)9 3313809 >>> VIB Department of Plant Systems Biology, Ghent University >>> Technologiepark 927, 9052 Gent, BELGIUM >>> ch...@psb.vib-ugent.be http://www.psb.vib-ugent.be >>> ================================================================== >>> >>> >>> ------------------------------------------------------------------------------ >>> What Every C/C++ and Fortran developer Should Know! >>> Read this article and learn how Intel has extended the reach of its >>> next-generation tools to help Windows* and Linux* C/C++ and Fortran >>> developers boost performance applications - including clusters. >>> http://p.sf.net/sfu/intel-dev2devmay >>> _______________________________________________ >>> Mzmine-devel mailing list >>> Mzmine-devel@lists.sourceforge.net >>> https://lists.sourceforge.net/lists/listinfo/mzmine-devel >>> >> =============================================== >> Tomas Pluskal >> G0 Cell Unit, Okinawa Institute of Science and Technology >> 1919-1 Tancha, Onna-son, Okinawa 904-0412, Japan >> TEL: +81-98-966-8684 >> >> >> >> > > > -- > ================================================================== > Chiarina Darrah > > Tel:+32 (0)9 331 38 85 fax:+32 (0)9 3313809 > VIB Department of Plant Systems Biology, Ghent University > Technologiepark 927, 9052 Gent, BELGIUM > ch...@psb.vib-ugent.be http://www.psb.vib-ugent.be > ================================================================== > > > ------------------------------------------------------------------------------ > What Every C/C++ and Fortran developer Should Know! > Read this article and learn how Intel has extended the reach of its > next-generation tools to help Windows* and Linux* C/C++ and Fortran > developers boost performance applications - including clusters. > http://p.sf.net/sfu/intel-dev2devmay > _______________________________________________ > Mzmine-devel mailing list > Mzmine-devel@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/mzmine-devel > =============================================== Tomas Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology 1919-1 Tancha, Onna-son, Okinawa 904-0412, Japan TEL: +81-98-966-8684 ------------------------------------------------------------------------------ vRanger cuts backup time in half-while increasing security. With the market-leading solution for virtual backup and recovery, you get blazing-fast, flexible, and affordable data protection. Download your free trial now. http://p.sf.net/sfu/quest-d2dcopy1 _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel
