If it's in centroid mode then if shouldn't really need any filters, just a
straight conversion. If you have a dropbox and don't mind passing the file on
to me I can take a look at it for you?
Cheers,
Gavin.
From: Julian Kang [mailto:manduma...@gmail.com]
Sent: 13 October 2011 15:56
To: mzmine-devel@lists.sourceforge.net
Subject: Re: [Mzmine-devel] Missing peaks in MzMine
The file is in centroid mode and I am also using msconvert.exe to convert the
file. I tried to play around with some of the export settings but it seems that
nothing really changes it. I did also try using using the Agilent software to
export the .d file as .mzdata but it resulted in an even lower quality data
file.
Re: [Mzmine-devel] Missing peaks in MzMine
From: Gavin Blackburn <gavin.blackburn@st...> - 2011-10-13 08:53
Hi Julian,
It depends on the file. Is it in centroid or profile mode? I'm not familiar
with .d files so I don't know which it would be. If it is in profile mode you
need to use the peak picking filter. Also, are you using the msconvertGUI.exe
or running it through a shell like R?
Cheers,
Gavin.
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