Hi Angela,

some information about your system would be helpful (Windows or Linux or 
Apple, error messages etc.).
Some hints:
You have to modify the start scripts, otherwise mzmine is unable to use 
more RAM than ~ 1G, change the HEAP_SIZE to 4096 for example. You will 
also need a 64bit Java version. Furthermore as far as I remember you 
have to install the free Thermo MS reader (not sure about the link ... 
try  http://sjsupport.thermofinnigan.com/public/detail.asp?id=703).
The last item is enough disk space because Mzmine creates a copy of raw 
data in the temporary folder.

Cheers

Marco




Am 26.10.2011 16:51, schrieb angela.m...@libero.it:
> Gentle MzMine team,
>   I've downloaded the last version of MZmine, but when I start the mass
> detection phase to process Themo Raw files (all MS1 experiments) it doesn't
> work! My computer has got more than
> 4 GB of RAM available and I need to process more than 12 Thermo Raw files. I
> only used crop filter as data set filter before starting mass detection and
> used centroid with 5e1 as peak detection parameter. Could
> you please help me?
>
> Kind regards,
>
> Angela Mari
>
>
> Angela Mari, PhD student
>   Department of Pharmaceutical and Biomedical Science
>   University of Salerno
>   Via Ponte Don Melillo, 84084
>   e-mail: a.ma...@studenti.unisa.it
>   mobile phone: 3491523102
>   office: +39 089969394
>
> ------------------------------------------------------------------------------
> The demand for IT networking professionals continues to grow, and the
> demand for specialized networking skills is growing even more rapidly.
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> https://lists.sourceforge.net/lists/listinfo/mzmine-devel
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------------------------------------------------------------------------------
The demand for IT networking professionals continues to grow, and the
demand for specialized networking skills is growing even more rapidly.
Take a complimentary Learning@Cisco Self-Assessment and learn 
about Cisco certifications, training, and career opportunities. 
http://p.sf.net/sfu/cisco-dev2dev
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