Michael,
There was a problem with the reading of 64 bit data from mzXML in mzMine
2.2. I submitted a patch to fix this which was included in version 2.3.
Updating to the latest version should fix this problem.
Thomas McGrew
Data Analyst/Programmer
Bindley Bioscience Center @ Purdue University
On Thu, Nov 10, 2011 at 6:51 AM, Michael Dickinson <
michael.dickin...@fera.gsi.gov.uk> wrote:
> Hi,****
>
> ** **
>
> I hope this is the right email to ask this question.****
>
> ** **
>
> I am currently using MZmine 2.2 and have imported mzXML files converted
> from Agilent ToF.d files. I have used pwiz file conversion tool with and
> without a peak picker filter (Binary encoding precision is set to 64bit).*
> ***
>
> However when I come to upload these onto MZmine, peaks are found but the
> masses recognised are things like 0.03, 0.11 *m/z* which is odd. It
> looks like it’s getting RT muddled with mass maybe.****
>
> Is this to do with the file conversion or MZ mine compatibility with
> converted Agilent data do you think?****
>
> ** **
>
> Many Thanks,****
>
> ** **
>
> Mike Dickinson.****
>
> ** **
>
> *-- *
>
> *Michael Dickinson*
>
> *Research LCMS Specialist*
>
> *Chemical and Biochemical Profiling Team*
>
> The Food and Environment Research Agency****
>
> 08FA02****
>
> ** **
>
> Email: michael.dickin...@fera.gsi.gov.uk****
>
> Web: www.defra.gov.uk/fera****
>
> Tel: +44 (0)1904 462728****
>
> ** **
>
> ** **
>
> Please consider the environment before printing this e-mail****
>
> ** **
>
> The information contained in this message may include privileged,
> proprietary or confidential information. Please treat it with the same
> respect that you would expect for your own information. If you have
> received it in error, we apologise and ask that you contact the sender
> immediately and erase it from your computer. Thank you for your
> co-operation.
>
> The original of this email was scanned for viruses by the Government
> Secure Intranet virus scanning service. On leaving the GSi this email was
> certified virus free.
>
>
> ------------------------------------------------------------------------------
> RSA(R) Conference 2012
> Save $700 by Nov 18
> Register now
> http://p.sf.net/sfu/rsa-sfdev2dev1
> _______________________________________________
> Mzmine-devel mailing list
> Mzmine-devel@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/mzmine-devel
>
>
------------------------------------------------------------------------------
RSA(R) Conference 2012
Save $700 by Nov 18
Register now
http://p.sf.net/sfu/rsa-sfdev2dev1
_______________________________________________
Mzmine-devel mailing list
Mzmine-devel@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/mzmine-devel
