G'day, I got this working with IntelliJ.
I've done some limited testing and got a ClassNotFoundException for ChemSpider searches indicating that Apache Commons Discovery is missing. [15:53:02|SEVERE|WorkerThread]: Unhandled exception java.lang.NoClassDefFoundError: org/apache/commons/discovery/tools/DiscoverSingleton while processing task Peak identification of 274.911 using ChemSpider Database(java.lang.NoClassDefFoundError: org/apache/commons/discovery/tools/discoversingle...@org.apache.axis.components.logger.LogFactory$1.run(LogFactory.java:45)) java.lang.NoClassDefFoundError: org/apache/commons/discovery/tools/DiscoverSingleton A quick comparison of the old lib/ directory with the new target/MZmine-*/lib/ directory shows the following are missing: commons-discovery jcommon-xml ostermillerutils resolver saaj serializer wsdl4j xercesSamples Regards, Chris. > Hi Chris, Sandra, everyone else, > > As I mentioned previously, I have switched the MZmine build system from ant > to maven. I am committing the changes at the moment. > > It seems to work fine, but there might still be hidden problems, so please be > careful when using the trunk over next few days. > > One of the required changes was to move the src/ folder to src/main/java/ > (standard folder structure required by maven). I am not sure what this change > might cause when you update your branch sources... so please make sure to > keep a backup of your files, just in case :) > > I created a fake maven repository in lib/ to include some of the dependencies > that do not (yet) have their own maven repository. > > To build MZmine from scratch, please run 'mvn package'. > The build should appear in the target/MZmine-version/ folder. > > So far I tried using Eclipse and it seems to have a reasonably good > integration of maven. > > Let me know if you have any other questions. > > Cheers, > > Tomas > > > =============================================== > Tomas Pluskal > G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University > 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan > TEL: +81-98-966-8684 This message may contain confidential information. If you are not the designated recipient, please notify the sender immediately, and delete the original and any copies. Any use of the message by you is prohibited. ------------------------------------------------------------------------------ Virtualization & Cloud Management Using Capacity Planning Cloud computing makes use of virtualization - but cloud computing also focuses on allowing computing to be delivered as a service. http://www.accelacomm.com/jaw/sfnl/114/51521223/ _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel
