Tomas,
Thank you very much for your swift reply, converting the RAW files to mzXML
works fine, thanks again.
Regards,
Edward
On Mon, May 14, 2012 at 11:58 AM, Tomas Pluskal <plus...@oist.jp> wrote:
> Hi Edward,
>
> It seems there is a great variety in the contents of the scan filter
> line provided by Thermo instruments (in your case "- c APCI sid = 5.00 Q1MS
> [200.000-600.000]").
> I adjusted the MZmine code to accommodate this, so you will be able to
> open the raw files using the next MZmine version.
>
> In the meantime, you can convert your data to mzXML using readw or
> msconvert (ProteoWizard). You should be able to import the mzXML files.
>
> Best regards,
>
> Tomas
>
>
> On May 14, 2012, at 6:45 PM, Edward Kaye wrote:
>
> To whom it may concern,
>
> I have an error message appear when I try to import my data:
>
> java.io.IOException:Unexpected format: SCAN FILTER : - c APCI sid = 5.00
> Q1MS [200.000-600.000] (XcaliburRawFileReadTask,java:223)
>
> Is there any way to fix this problem so that I may use mzmine?
>
> Regards,
>
> Edward Kaye
>
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> ===============================================
> Tomáš Pluskal
> G0 Cell Unit, Okinawa Institute of Science and Technology Graduate
> University
> 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
> TEL: +81-98-966-8684
> Fax: +81-98-966-2890
>
>
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