Hi Raghavendra,
Sorry for the late response. The answer is yes, it is possible to develop such
module. But you have to find someone who will develop it.
Unfortunately, I don't have time to work on MZmine now, because I am busy with
other work.
Best regards,
Tomas
On Jan 9, 2013, at 7:56 AM, Raghavendra Gunnaiah
<raghavendra.gunna...@mail.mcgill.ca<mailto:raghavendra.gunna...@mail.mcgill.ca>>
wrote:
Dear Developers and users,
One of the metabolite (say phenylalanine (M=165.07)) forms several conjugates
with other compounds (Eg: Jasmonyl pheneylalanine, Indole phenylalanine and
many more unidentified conjugates). When I look at the MS/MS fragmentation of
Jasmonyl pheneylalanine and Indole phenylalanine, I observe a MS/MS fragments
165.07 /164.07 (M-H) representing phenylalanine. However, there may be several
such unknown conjugates formed by phenylalanine.
Is it possible develop a module for extracting all the peaks that contain given
MS/MS fragment?
I appreciate and acknowledge your contribution
regards
Raghavendra Gunnaiah
Ph.D Scholar
R1-013,Department of Plant Science
McGill University Macdonald Campus
21,111 Lakeshore Road
Ste. Anne de Bellevue, QC H9X 3V9
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