Hi Katerina,
Please see the following post from Chris Pudney in the mailing list archive:
http://sourceforge.net/mailarchive/message.php?msg_id=30700997
Best regards,
Tomas
On Sep 19, 2013, at 8:24 PM, Oresic Matej <matej.ore...@vtt.fi> wrote:
>
>
> From: Katerina Kokkotou [mailto:kkokko...@yahoo.com]
> Sent: Thursday, September 19, 2013 1:54 PM
> To: Oresic Matej
> Subject: MZmine troubleshoot
>
>
> Dear Matej,
>
> How are you?
>
> I 'm trying to process LC-Orbitrap-MS data with MZ-mine 2.10.
>
> I also installed R package (R-3.0.1), in order to run the baseline correction
> feature
>
> and I have changed the appropriate paths and directories in MZmine batch
> file as follows
>
>
> rem Set R environment variables.
> set R_HOME=C:\Program Files\R\R-3.0.1
> set R_SHARE_DIR=%R_HOME%\share
> set R_INCLUDE_DIR=%R_HOME%\include
> set R_DOC_DIR=%R_HOME%\doc
> set R_LIBS_USER=%USERPROFILE%\Documents\R\win-library\3.0
>
>
> Despite this modification in the batch file, each time i'm applying BSL
> correction,
>
> an error message pops up saying that R is not installed or that the path to
> the libraries is not properly installed.
>
> I forgot to mention that I'm running on a 32-bit system.
>
> Is it possible to help me with this problem?
>
> Thank you for your time
>
> Katerina
>
>
>
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===============================================
Tomas Pluskal
G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University
1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
WWW: https://groups.oist.jp/g0
TEL: +81-98-966-8684
Fax: +81-98-966-2890
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