Dear Developpers,
My name is Gilda, I'm a PhD student;
I'm resaerching metabolomics by OrbitrapXL (Thermo), and for the first time I'm
using Mzmine to normalize my data, but I have some problem.
I try to put three raw data in triplicate so they are 9 rawdata (about 34 KB
for each one);
I do mass detection, chromatogram builder and then when I do chromatogram
deconvolution appear this message "Java heap Space".. what I can do?
The system of my pc is:
Rating: 5,9 windows experience Index
Installed memory (RAM) 8 GB
system type 64-bit Operating system
so I change the memory in mzmine and put 8000
@echo off
rem Obtain the physical memory
size
for /f "skip=1" %%p in ('wmic os get totalvisiblememorysize') do if not defined
TOTAL_MEMORY=set TOTAL_MEMORY=%%p
rem The HEAP_SIZE variable defines the Java heap size in MB.
rem That is the total amount of memory available to MZmine 2.
rem By default we set this to the half of the physical memory
rem size, but feel free to adjust according to your needs.
set /a HEAP_SIZE=%TOTAL_MEMORY% / 1024 / 2
rem Check if we are running on a 32-bit system.
rem If yes, force the heap size to 1024 MB.
for /f "skip=1" %%x in ('wmic cpu get addresswidth') do if not defined
ADDRESS_WIDTH set ADDRESS_WIDTH=%%x
if %ADDRESS_WIDTH%==32 (
set HEAP_SIZE=8000
Could you help me?
Thank you very much.
Gilda------------------------------------------------------------------------------
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