Hi Gauthier, Thank you for the report!
Victor, can you take a look at this? It seems the error happens in the very beginning of the task: minMasa = mzV[0].getMZ(); Perhaps the data contains a scan with no data points, and that causes the exception. Cheers, Tomas On Aug 12, 2014, at 16:48, Gauthier Boaglio <gauthier.boag...@gmail.com> wrote: > Hi Tomas, > > To accomplish my duty, here is a bug I get with the GridMass - 2D module > (hope this is not a duplicate of any anterior report/fix). Usually, I would > have preferred to provide a fix, rather than just reporting, but I really > need to be far from keyboard for a moment... > > [9:26:25|INFO|GridMassTask]: Started GRIDMASS v1.0 [Apr-09-2014] on > T0_128_V3_221112.cdf > [9:26:25|SEVERE|WorkerThread]: Unhandled exception > java.lang.ArrayIndexOutOfBoundsException: 0 while processing task Detecting > chromatograms (RT) in > T0_128_V3_221112.cdf(java.lang.ArrayIndexOutOfBoundsException: > 0...@net.sf.mzmine.modules.rawdatamethods.peakpicking.gridmass.gridmasstask.run(GridMassTask.java:150)) > java.lang.ArrayIndexOutOfBoundsException: 0 > at > net.sf.mzmine.modules.rawdatamethods.peakpicking.gridmass.GridMassTask.run(GridMassTask.java:150) > at net.sf.mzmine.taskcontrol.impl.WorkerThread.run(WorkerThread.java:60) > > Attachment: The ".mzmine" project file containing the raw dataset used for > testing, as well as the parameters used to get the error (even if I had the > same error for all the combinations of parameters I tried with the module). > > Note: The raw dataset I used, is one of those I systematically use, since I'm > working on/with MZmine2. So the input data ain't the cause... > > > Cheers > Gaut > > =============================================== Tomas Pluskal G0 Cell Unit, Okinawa Institute of Science and Technology Graduate University 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan WWW: https://groups.oist.jp/g0 TEL: +81-98-966-8684 Fax: +81-98-966-2890 ------------------------------------------------------------------------------ _______________________________________________ Mzmine-devel mailing list Mzmine-devel@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/mzmine-devel
